RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 GM2AP17900 193 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 GJC1P36383 396 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 PEX5P50542 639 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 DUSP3P51452 185 aaPredicted RBP19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 ARSEP51690 589 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 MAXP61244 160 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 POLR2LP62875 67 aaKnown RBP19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 ALG11Q2TAA5 492 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 SKOR2Q2VWA4 1001 aaPredicted RBP19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 CDCP2Q5VXM1 449 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 KCTD16Q68DU8 428 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 ENPP7Q6UWV6 458 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 DPPA4Q7L190 304 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 HID1Q8IV36 788 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 NUDCD1Q96RS6 583 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 NRSN2Q9GZP1 204 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 USP29Q9HBJ7 922 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 CTTNBP2NLQ9P2B4 639 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 SALL4Q9UJQ4 1053 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 PCDHB1Q9Y5F3 818 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 IGSF10Q6WRI0 2623 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 COL27A1Q8IZC6 1860 aaPredicted RBP19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 CFAP69A5D8W1 941 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 LMO7DNF2Z398 122 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 YY2O15391 372 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 HTRA2O43464 458 aaPredicted RBP19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 GP1BAP07359 652 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 ELFN1P0C7U0 828 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 SERPINB6P35237 376 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 HK3P52790 923 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 DPYSL3Q14195 570 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 NFATC4Q14934 902 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 RTP5Q14D33 572 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 SLC18A3Q16572 532 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 HADHQ16836 314 aaKnown RBP19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 ASTE1Q2TB18 679 aaPredicted RBP19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 COL28A1Q2UY09 1125 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 SPECC1LQ69YQ0 1117 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 RD3Q7Z3Z2 195 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 PDCD6IPQ8WUM4 868 aaKnown RBP19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 DNAJC7Q99615 494 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 MGME1Q9BQP7 344 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 BOCQ9BWV1 1114 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 SCUBE2Q9NQ36 999 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 RCOR3Q9P2K3 495 aaPredicted RBP19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 B4GALT6Q9UBX8 382 aa19.37■□□□□ 0.69
SMARCB1-204ENST00000407422 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 TMEM110-MUSTN1A8MSY1 372 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 MFSD11O43934 449 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 PROSCO94903 275 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 HSPA9P38646 679 aaKnown RBP19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 MMP13P45452 471 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 TAS2R40P59535 323 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 MARC1Q5VT66 337 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 EFL1Q7Z2Z2 1120 aaKnown RBP19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 SLC35F3Q8IY50 421 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 PELI3Q8N2H9 469 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 OR8K1Q8NGG5 319 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 PCDH19Q8TAB3 1148 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 MAPK15Q8TD08 544 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 TBATAQ96M53 351 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 ANP32EQ9BTT0 268 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 EME2A4GXA9 379 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 CASC3O15234 703 aaKnown RBP19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 TLX3O43711 291 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 MAP3K6O95382 1288 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 ANXA6P08133 673 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 TGM2P21980 687 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 HTR1BP28222 390 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 TRAF2Q12933 501 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 MTM1Q13496 603 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 PTPRRQ15256 657 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 NR0B2Q15466 257 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 C6orf132Q5T0Z8 1188 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 NCBP2-AS2Q69YL0 99 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 CRTC1Q6UUV9 634 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 CTNNBL1Q8WYA6 563 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 SPOCK2Q92563 424 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 ABCG4Q9H172 646 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 EVA1BQ9NVM1 165 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 UVRAGQ9P2Y5 699 aa19.36■□□□□ 0.69
SMARCB1-204ENST00000407422 SOCS5O75159 536 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 H2AFZP0C0S5 128 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 BLKP51451 505 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 SRP54P61011 504 aaKnown RBP19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 ACOX1Q15067 660 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 KIF26BQ2KJY2 2108 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 PERM1Q5SV97 790 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 H2AFVQ71UI9 128 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 KCTD6Q8NC69 237 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 RNF214Q8ND24 703 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 NSMCE1Q8WV22 266 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 FUBP1Q96AE4 644 aaKnown RBP19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 PDXPQ96GD0 296 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 WDR92Q96MX6 357 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 DCBLD2Q96PD2 775 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 NT5MQ9NPB1 228 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 NCKIPSDQ9NZQ3 722 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 KLQ9UEF7 1012 aa19.35■□□□□ 0.69
SMARCB1-204ENST00000407422 TMEM202A6NGA9 273 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms