RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ESRRAP11474 423 aaPredicted RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 PSMC3P17980 439 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 VIPR2P41587 438 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 GRIA1P42261 906 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 KPNA2P52292 529 aaKnown RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 KPNA1P52294 538 aaPredicted RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 GTF2A1P52655 376 aaPredicted RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 CYP4F8P98187 520 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 FOXC1Q12948 553 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 LAMB3Q13751 1172 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 BMPR2Q13873 1038 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 GAS6Q14393 721 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 TEAD2Q15562 447 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 ANKRD20A4Q4UJ75 823 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 ARHGAP15Q53QZ3 475 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 PCID2Q5JVF3 399 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 FAM72AQ5TYM5 149 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 FAM72DQ6L9T8 149 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 RWDD4Q6NW29 188 aaKnown RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 FAM72BQ86X60 149 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 OR52K1Q8NGK4 314 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 ADAM32Q8TC27 787 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 CSGALNACT1Q8TDX6 532 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 NSMCE1Q8WV22 266 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 ISL2Q96A47 359 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 RBBP8Q99708 897 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 MMADHCQ9H3L0 296 aaPredicted RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 RETREG1Q9H6L5 497 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 PLAC1Q9HBJ0 212 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 APOBEC2Q9Y235 224 aaKnown RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 STK38LQ9Y2H1 464 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 KCNK1O00180 336 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 TM4SF5O14894 197 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 SNNO75324 88 aaPredicted RBP13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 PIAS1O75925 651 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 KLHL2O95198 593 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 JCHAINP01591 159 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 SERPINE1P05121 402 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 COL6A2P12110 1019 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 NFKB1P19838 968 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 SPINK2P20155 84 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 FCARP24071 287 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 NDST2P52849 883 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 LIMK1P53667 647 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 LIMK2P53671 638 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 KCNJ2P63252 427 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 OCRLQ01968 901 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 BST1Q10588 318 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 EIF4EBP2Q13542 120 aaPredicted RBP13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 LRRC32Q14392 662 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 FASTKD1Q53R41 847 aaKnown RBP13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 GPR158Q5T848 1215 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 TXNDC8Q6A555 127 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 MSANTD2Q6P1R3 559 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 VITQ6UXI7 678 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 Q6ZS52 159 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 YAF2Q8IY57 180 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 CCDC33Q8N5R6 958 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 PPHLN1Q8NEY8 458 aaKnown RBP13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 RFWD2Q8NHY2 731 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 TTC8Q8TAM2 541 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 RDH11Q8TC12 318 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 LRRN4Q8WUT4 740 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 SKA1Q96BD8 255 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 THOC1Q96FV9 657 aaKnown RBP13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 AGAP3Q96P47 875 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 IL12RB2Q99665 862 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 BTBD10Q9BSF8 475 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 GLOD4Q9HC38 313 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 TRPC7Q9HCX4 862 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 NOP53Q9NZM5 478 aaKnown RBP13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 HAO1Q9UJM8 370 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 TLR6Q9Y2C9 796 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 PKD1L2Q7Z442 2459 aa13.01□□□□□ -0.33
SMARCB1-203ENST00000407082 A0A1W2PQH9 124 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 TMEM114B3SHH9 223 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 K7ESF4 209 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 TPP1O14773 563 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 PLIN3O60664 434 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 KRT16P08779 473 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 ZDHHC11BP0C7U3 371 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 ZNF806P0C7X5 589 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 MYL2P10916 166 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 SOX9P48436 509 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 PXNP49023 591 aaPredicted RBP13□□□□□ -0.33
SMARCB1-203ENST00000407082 PGFP49763 221 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 NOVA1P51513 510 aaKnown RBP13□□□□□ -0.33
SMARCB1-203ENST00000407082 OVGP1Q12889 678 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 MPP3Q13368 585 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 PREPLQ4J6C6 727 aaPredicted RBP13□□□□□ -0.33
SMARCB1-203ENST00000407082 WLSQ5T9L3 541 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 C6orf163Q5TEZ5 329 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms