RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 GRHL1Q9NZI5 618 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 WHRNQ9P202 907 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 ANAPC5Q9UJX4 755 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 AREL1O15033 823 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 TP73O15350 636 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 IGLV3-19P01714 112 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 FNTBP49356 437 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 HIBCHQ6NVY1 386 aaPredicted RBP33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 ERAP2Q6P179 960 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 ZNF534Q76KX8 674 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 HOOK3Q86VS8 718 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 FAM160A2Q8N612 972 aaPredicted RBP33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 MCCC1Q96RQ3 725 aaPredicted RBP33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 CASS4Q9NQ75 786 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 B4GALT6Q9UBX8 382 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 INVSQ9Y283 1065 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 FADS3Q9Y5Q0 445 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 A0A0U1RQS6 177 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 NPIPB15A6NHN6 443 aaPredicted RBP33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 SLC7A4O43246 635 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 TPH1P17752 444 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 ACSL1P33121 698 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 SUOXP51687 545 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 ADPRHP54922 357 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 CALCOCO2Q13137 446 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 MORF4L2Q15014 288 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 MCUQ8NE86 351 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 SEC14L1Q92503 715 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 BTBD1Q9H0C5 482 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 FBXO4Q9UKT5 387 aa33.42■■■□□ 2.94
CSNK1E-204ENST00000403904 CAPN8A6NHC0 703 aa33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 PLRG1O43660 514 aaKnown RBP33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 DRG2P55039 364 aaKnown RBP33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 SARNPP82979 210 aaKnown RBP33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 CDH17Q12864 832 aa33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 MTM1Q13496 603 aa33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 MAP7D1Q3KQU3 841 aa33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 BBOF1Q8ND07 529 aa33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 SPO11Q9Y5K1 396 aa33.41■■■□□ 2.94
CSNK1E-204ENST00000403904 CCDC163A0A0D9SF12 145 aa33.4■■■□□ 2.94
CSNK1E-204ENST00000403904 BHMG1C9JSJ3 638 aaPredicted RBP33.4■■■□□ 2.94
CSNK1E-204ENST00000403904 NEMP1O14524 444 aa33.4■■■□□ 2.94
CSNK1E-204ENST00000403904 MMP12P39900 470 aa33.4■■■□□ 2.94
CSNK1E-204ENST00000403904 ELP6Q0PNE2 266 aa33.4■■■□□ 2.94
CSNK1E-204ENST00000403904 TOE1Q96GM8 510 aaKnown RBP33.4■■■□□ 2.94
CSNK1E-204ENST00000403904 SHOC2Q9UQ13 582 aa33.4■■■□□ 2.94
CSNK1E-204ENST00000403904 IGHV1OR15-9A0A0B4J2B8 117 aa33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 FAM47DPA6NHR8 397 aa33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 NFKBIAP25963 317 aa33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 OXTRP30559 389 aa33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 LRRC8BQ6P9F7 803 aa33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 TSPAN33Q86UF1 283 aa33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 CAND1Q86VP6 1230 aaKnown RBP33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 BLOC1S5Q8TDH9 187 aa33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 MYLKQ15746 1914 aa33.39■■■□□ 2.94
CSNK1E-204ENST00000403904 AP1G1O43747 822 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 AVILO75366 819 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 CD6P30203 668 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 MSLNQ13421 630 aaPredicted RBP33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 ANGPT1Q15389 498 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 USP39Q53GS9 565 aaKnown RBP33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 CRTC1Q6UUV9 634 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 DPPA4Q7L190 304 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 SERPINB12Q96P63 405 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 WRAP53Q9BUR4 548 aaKnown RBP33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 SGK2Q9HBY8 427 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 MAGEE1Q9HCI5 957 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 WSB2Q9NYS7 404 aaPredicted RBP33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 PRR23AA6NEV1 266 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 PCDH8O95206 1070 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 CYP2A6P11509 494 aaPredicted RBP33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 LHCGRP22888 699 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 VIPR1P32241 457 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 PLTPP55058 493 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 SESN2P58004 480 aaPredicted RBP33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 RALGDSQ12967 914 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 CERCAMQ5T4B2 595 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 DENND2CQ68D51 928 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 LYSMD1Q96S90 227 aa33.38■■■□□ 2.93
CSNK1E-204ENST00000403904 ZNF318Q5VUA4 2279 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3DA0A087WVF3 549 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3IA0A087WXS9 549 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3EA0A087X179 549 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3KA0A087X1G2 549 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3FA6NER0 549 aaPredicted RBP33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3LB9A6J9 549 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 NDC80O14777 642 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3HP0C7X1 549 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3GQ6DHY5 549 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3CQ6IPX1 549 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 WDR5BQ86VZ2 330 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 LONP2Q86WA8 852 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 TBC1D3Q8IZP1 549 aaPredicted RBP33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 ART4Q93070 314 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 PWWP2AQ96N64 755 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 LRFN3Q9BTN0 628 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 EPC1Q9H2F5 836 aa33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 XAB2Q9HCS7 855 aaKnown RBP33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 NOL12Q9UGY1 213 aaKnown RBP eCLIP33.37■■■□□ 2.93
CSNK1E-204ENST00000403904 V9GYY5 206 aaPredicted RBP33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms