RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 PDXPQ96GD0 296 aa9.34□□□□□ -0.91
NUP43-204ENST00000403890 DPYSL5Q9BPU6 564 aa9.34□□□□□ -0.91
NUP43-204ENST00000403890 ZPBPQ9BS86 351 aa9.34□□□□□ -0.91
NUP43-204ENST00000403890 SLC29A3Q9BZD2 475 aa9.34□□□□□ -0.91
NUP43-204ENST00000403890 TM6SF2Q9BZW4 377 aa9.34□□□□□ -0.91
NUP43-204ENST00000403890 TMEM168Q9H0V1 697 aa9.34□□□□□ -0.91
NUP43-204ENST00000403890 COQ4Q9Y3A0 265 aa9.34□□□□□ -0.91
NUP43-204ENST00000403890 PCDHB4Q9Y5E5 795 aa9.34□□□□□ -0.91
NUP43-204ENST00000403890 ARHGEF17Q96PE2 2063 aaPredicted RBP9.34□□□□□ -0.91
NUP43-204ENST00000403890 CELSR1Q9NYQ6 3014 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 ILVBLA1L0T0 632 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 KRIT1O00522 736 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 STK17BO94768 372 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 POP4O95707 220 aaKnown RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 CALCAP01258 141 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 UGT2B4P06133 528 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 THRAP10827 490 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 PRF1P14222 555 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 TIMP2P16035 220 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 MPSTP25325 297 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 VARSP26640 1264 aaKnown RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 STAT5AP42229 794 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 NOP2P46087 812 aaKnown RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 PMS2P54278 862 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 MAZP56270 477 aaKnown RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 MC2RQ01718 297 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 LRMPQ12912 555 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 NME3Q13232 169 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 BIRC2Q13490 618 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 SQSTM1Q13501 440 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 ERV3-1Q14264 604 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 TAF5Q15542 800 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 CBWD6Q4V339 395 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 LRRC73Q5JTD7 316 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 CBWD3Q5JTY5 395 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 CBWD5Q5RIA9 395 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 CEACAM20Q6UY09 585 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 TFAP2DQ7Z6R9 452 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 TMEM110Q86TL2 294 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 C17orf82Q86X59 251 aaPredicted RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 CEP57L1Q8IYX8 460 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 BMPERQ8N8U9 685 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 OR56A4Q8NGH8 313 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 OR6K2Q8NGY2 324 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 STK32AQ8WU08 396 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 PDCD6IPQ8WUM4 868 aaKnown RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 OR1E3Q8WZA6 343 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 C5orf34Q96MH7 638 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 KLHL32Q96NJ5 620 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 WRAP53Q9BUR4 548 aaKnown RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 OSBPL1AQ9BXW6 950 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 SLC5A6Q9Y289 635 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 TMEM184BQ9Y519 407 aaPredicted RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 MRPS18BQ9Y676 258 aaKnown RBP9.33□□□□□ -0.92
NUP43-204ENST00000403890 PDZD2O15018 2839 aa9.33□□□□□ -0.92
NUP43-204ENST00000403890 DRGXA6NNA5 263 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 INPP4BO15327 924 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 SORBS2O94875 1100 aaKnown RBP9.32□□□□□ -0.92
NUP43-204ENST00000403890 ITIH2P19823 946 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 SYT1P21579 422 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 LEPRP48357 1165 aaKnown RBP9.32□□□□□ -0.92
NUP43-204ENST00000403890 SH3BP2P78314 561 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 ARF5P84085 180 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 GUCA2AQ02747 115 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 POLD3Q15054 466 aaPredicted RBP9.32□□□□□ -0.92
NUP43-204ENST00000403890 MYLK3Q32MK0 819 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 NADK2Q4G0N4 442 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 NKAIN2Q5VXU1 208 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 TMEM71Q6P5X7 295 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 FOXR2Q6PJQ5 311 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 LRRC31Q6UY01 552 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 ZNF783Q6ZMS7 281 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 TP53INP2Q8IXH6 220 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 ZNF683Q8IZ20 524 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 DEFB106AQ8N104 65 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 ESX1Q8N693 406 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
NUP43-204ENST00000403890 CCL4L1Q8NHW4 92 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 SLC2A13Q96QE2 648 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 CTRCQ99895 268 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 ATP13A1Q9HD20 1204 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 SPATS2LQ9NUQ6 558 aaKnown RBP9.32□□□□□ -0.92
NUP43-204ENST00000403890 MPP6Q9NZW5 540 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 COQ6Q9Y2Z9 468 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 OAS3Q9Y6K5 1087 aaKnown RBP9.32□□□□□ -0.92
NUP43-204ENST00000403890 RPS6KL1Q9Y6S9 549 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 MED13LQ71F56 2210 aa9.32□□□□□ -0.92
NUP43-204ENST00000403890 SPG11Q96JI7 2443 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 IGHV1OR21-1A0A087WYE8 117 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 TMEM202A6NGA9 273 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 E5RJQ4 531 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 CACNB4O00305 520 aaPredicted RBP9.31□□□□□ -0.92
NUP43-204ENST00000403890 TNFRSF10CO14798 259 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 ECEL1O95672 775 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 CD160O95971 181 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 FGF1P05230 155 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 GLI1P08151 1106 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 FURINP09958 794 aa9.31□□□□□ -0.92
NUP43-204ENST00000403890 EPB41P11171 864 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms