RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TYSND1Q2T9J0 566 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 PACS2Q86VP3 889 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 WDR75Q8IWA0 830 aaKnown RBP12.31□□□□□ -0.44
CLIP4-203ENST00000401617 BBS7Q8IWZ6 715 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 OR13C4Q8NGS5 318 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 PHOSPHO2Q8TCD6 241 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 HERVK_113Q902F9 699 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 INPP5DQ92835 1189 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 TSPAN17Q96FV3 270 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 CDKN2AIPNLQ96HQ2 116 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 TCF25Q9BQ70 676 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 TUBB6Q9BUF5 446 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 GATA5Q9BWX5 397 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-203ENST00000401617 SLC46A2Q9BY10 475 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 SUDS3Q9H7L9 328 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-203ENST00000401617 IGSF5Q9NSI5 407 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 CFAP97Q9P2B7 532 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 LNPEPQ9UIQ6 1025 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 VPS28Q9UK41 221 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 CORO1CQ9ULV4 474 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-203ENST00000401617 VWA7Q9Y334 891 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 A0A1W2PRU2 124 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 LCHNA4D1U4 455 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 OR51F1A6NGY5 319 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 TK2O00142 265 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CD3EAPO15446 510 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 HNRNPCL1O60812 293 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 GLP2RO95838 553 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 OGNP20774 298 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CA8P35219 290 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 SLC26A3P40879 764 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CLCN4P51793 760 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 KCNJ2P63252 427 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 ELF3P78545 371 aaPredicted RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 TRAF2Q12933 501 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 TUBB3Q13509 450 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 PTPRCAPQ14761 206 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 MPPE1Q53F39 396 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 HECTD2Q5U5R9 776 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 LIPMQ5VYY2 423 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 PSRC1Q6PGN9 363 aaPredicted RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 LINGO4Q6UY18 593 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 TDRD5Q8NAT2 981 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 MDGA1Q8NFP4 955 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 SPPL3Q8TCT6 385 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 PPP4R1Q8TF05 950 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 SLC22A17Q8WUG5 538 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 SREK1Q8WXA9 508 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 LMLNQ96KR4 655 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 UBXN10Q96LJ8 280 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 TMEM237Q96Q45 408 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 MRPL57Q9BQC6 102 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 ASAH2Q9NR71 780 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 HAO1Q9UJM8 370 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 ARHGAP26Q9UNA1 814 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 TRIM33Q9UPN9 1127 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CXorf51AA0A1B0GTR3 108 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 ANKRD66B4E2M5 251 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 LEFTY2O00292 366 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 FCHO1O14526 889 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 MGRN1O60291 552 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 FZD6O60353 706 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 PIRTP0C851 137 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 KITP10721 976 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 HOXB8P17481 243 aaPredicted RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 TARSP26639 723 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CCR2P41597 374 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 PLK1P53350 603 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 SLC12A2P55011 1212 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 ZBTB16Q05516 673 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CDH18Q13634 790 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 MRNIPQ6NTE8 343 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CYB5D1Q6P9G0 228 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 TBC1D1Q86TI0 1168 aaPredicted RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 RNF135Q8IUD6 432 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 MFN1Q8IWA4 741 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 OR4L1Q8NH43 312 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 FIBINQ8TAL6 211 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 HEXDCQ8WVB3 486 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 PRR11Q96HE9 360 aaPredicted RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CORO1BQ9BR76 489 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 ADGRE3Q9BY15 652 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 FAM96AQ9H5X1 160 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CPSF2Q9P2I0 782 aaKnown RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 MARCOQ9UEW3 520 aaPredicted RBP12.3□□□□□ -0.44
CLIP4-203ENST00000401617 SH3BP1Q9Y3L3 701 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 PCDHGC4Q9Y5F7 938 aa12.3□□□□□ -0.44
CLIP4-203ENST00000401617 CAPN14A8MX76 684 aa12.29□□□□□ -0.44
CLIP4-203ENST00000401617 CCL16O15467 120 aa12.29□□□□□ -0.44
CLIP4-203ENST00000401617 BUD23O43709 281 aaKnown RBP12.29□□□□□ -0.44
CLIP4-203ENST00000401617 DLX3O60479 287 aa12.29□□□□□ -0.44
CLIP4-203ENST00000401617 CBX6O95503 412 aa12.29□□□□□ -0.44
CLIP4-203ENST00000401617 MYL4P12829 197 aa12.29□□□□□ -0.44
CLIP4-203ENST00000401617 CSNK1DP48730 415 aa12.29□□□□□ -0.44
CLIP4-203ENST00000401617 SUOXP51687 545 aa12.29□□□□□ -0.44
CLIP4-203ENST00000401617 KPNA2P52292 529 aaKnown RBP12.29□□□□□ -0.44
CLIP4-203ENST00000401617 TIAL1Q01085 375 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLIP4-203ENST00000401617 SEMA3AQ14563 771 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms