RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TRIM38O00635 465 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 MATN3O15232 486 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 PSMD3O43242 534 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 SCNN1AP37088 669 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 KCTD11Q693B1 232 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 DHFR2Q86XF0 187 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 CANT1Q8WVQ1 401 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 MAF1Q9H063 256 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 KATNBL1Q9H079 304 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 FOXD2O60548 495 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 MAFKO60675 156 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 KATNA1O75449 491 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 KCNC1P48547 511 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 IL1RL1Q01638 556 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 DYNC1I2Q13409 638 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 GDF6Q6KF10 455 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 MRGPRX2Q96LB1 330 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 SOX17Q9H6I2 414 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 IRAK4Q9NWZ3 460 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 FAF1Q9UNN5 650 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 HS3ST4Q9Y661 456 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 IRAK2O43187 625 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 HGFP14210 728 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 RPL5P46777 297 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 ZIK1Q3SY52 487 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 PIGGQ5H8A4 983 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 INTS6LQ5JSJ4 861 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 TMEM86AQ8N2M4 240 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 TTC9BQ8N6N2 239 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 FAM47BQ8NA70 645 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 NT5C3BQ969T7 300 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 OSBPL2Q9H1P3 480 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 OCEL1Q9H607 264 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 ABCC13Q9NSE7 274 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 GMIPQ9P107 970 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 PRORSD1PA6NEY8 169 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 NRP2O60462 931 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 GLP2RO95838 553 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 MTHFD1P11586 935 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 PCNAP12004 261 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 CCNCP24863 283 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 ACVRL1P37023 503 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 RENBPP51606 427 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 ZNF157P51786 506 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 POTEHQ6S545 545 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 CLEC14AQ86T13 490 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 OFCC1Q8IZS5 231 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 PDZD8Q8NEN9 1154 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 FBXO32Q969P5 355 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 PBXIP1Q96AQ6 731 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 DNAJB4Q9UDY4 337 aa12.71□□□□□ -0.37
PPP4R1-202ENST00000400555 TNFAIP8O95379 198 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 RBP1P09455 135 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 CDKN2DP55273 166 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 GRB14Q14449 540 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 POLD3Q15054 466 aaPredicted RBP12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 TAF12Q16514 161 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 TSTD2Q5T7W7 516 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 SPPL2BQ8TCT7 592 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 TMIGD2Q96BF3 282 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 ZNF512Q96ME7 567 aaPredicted RBP12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 SLC29A1Q99808 456 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 RNF112Q9ULX5 631 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 TRPV2Q9Y5S1 764 aa12.71□□□□□ -0.38
PPP4R1-202ENST00000400555 A0A0J9YYE9 177 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 GABRDO14764 452 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 NDUFS3O75489 264 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 SLC2A3P11169 496 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 ARNTP27540 789 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 CDK18Q07002 472 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 TRIM25Q14258 630 aaKnown RBP12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 PLA2G4EQ3MJ16 856 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 CMPK2Q5EBM0 449 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 C6orf10Q5SRN2 563 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 ARHGAP12Q8IWW6 846 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 CALML6Q8TD86 181 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 TSPAN17Q96FV3 270 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 VPS50Q96JG6 964 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 FCRL5Q96RD9 977 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 ACOX2Q99424 681 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 C1QTNF1Q9BXJ1 281 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 SPAG4Q9NPE6 437 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 CROCCQ5TZA2 2017 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 POU4F1Q01851 419 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 PTPRRQ15256 657 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 TTC33Q6PID6 262 aaPredicted RBP12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 NAT16Q8N8M0 369 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 TSPAN14Q8NG11 270 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 C3orf30Q96M34 536 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 KATNAL1Q9BW62 490 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 PTCH2Q9Y6C5 1203 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 ENPP3O14638 875 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 PIP5K1BO14986 540 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 RAMP2O60895 175 aa12.7□□□□□ -0.38
PPP4R1-202ENST00000400555 PIK3CGP48736 1102 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms