RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 INTS11Q5TA45 600 aaKnown RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 KRT73Q86Y46 540 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 MYO19Q96H55 970 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 MPP4Q96JB8 637 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 QKIQ96PU8 341 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 KIAA1522Q9P206 1035 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 ANKRD26Q9UPS8 1709 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 SLC28A1O00337 649 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 SPRYD7Q5W111 196 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 RNFT2Q96EX2 444 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 PCED1BQ96HM7 432 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 TEKT5Q96M29 485 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 A0A087WXM4 84 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 SLC25A14O95258 325 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 GLUD1P00367 558 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 CYP3A5P20815 502 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 CDC25CP30307 473 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 CORO1AP31146 461 aaKnown RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 INAQ16352 499 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 OR4K2Q8NGD2 314 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 PTCD3Q96EY7 689 aaKnown RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 HSD3B7Q9H2F3 369 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 WRAP73Q9P2S5 460 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 FBXL21Q9UKT6 434 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF214Q9UL59 606 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 NEDD8-MDP1E9PL57 170 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 TRIM24O15164 1050 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 TLL1O43897 1013 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 C1RP00736 705 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 VAV1P15498 845 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 TALDO1P37837 337 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 PTP4A2Q12974 167 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 PARP15Q460N3 678 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 ANKRD22Q5VYY1 191 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF549Q6P9A3 640 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 ARHGEF4Q9NR80 690 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 PSME2Q9UL46 239 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 FAM25AB3EWG3 89 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 FAM25CB3EWG5 89 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 FAM25GB3EWG6 89 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 RFWD3Q6PCD5 774 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 ZC3H7AQ8IWR0 971 aaKnown RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 C6orf62Q9GZU0 229 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 ABCG8Q9H221 673 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 PRR5-ARHGAP8B1AHC4 643 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 EIF2S1P05198 315 aaKnown RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 PTPN9P43378 593 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 IDH2P48735 452 aaKnown RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 ARHGAP8P85298 464 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 CUZD1Q86UP6 607 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 TRAF6Q9Y4K3 522 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 A0A1B0GW55 424 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 DUX4L2P0CJ85 424 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 DUX4L3P0CJ86 424 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 DUX4L4P0CJ87 422 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 DUX4L5P0CJ88 424 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 DUX4L6P0CJ89 424 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 DUX4L7P0CJ90 424 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 ATP6V1C1P21283 382 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 CRHR1P34998 444 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 CCR4P51679 360 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 ZIK1Q3SY52 487 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 C8orf59Q8N0T1 100 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 WDR36Q8NI36 951 aaKnown RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 HNRNPABQ99729 332 aaKnown RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 DGCR6LQ9BY27 220 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 BCAS3Q9H6U6 928 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 DUX4Q9UBX2 424 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 PIK3C2AO00443 1686 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 IFNGR2P38484 337 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 NDUFV1P49821 464 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 SKP1P63208 163 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 SLC1A5Q15758 541 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 PLPP4Q5VZY2 271 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 MFSD5Q6N075 450 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 SLC4A5Q9BY07 1137 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 GRIP2Q9C0E4 1043 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 CEP44Q9C0F1 390 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 A0A0G2JLL6 359 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 ARL5CA6NH57 179 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 UMPSP11172 480 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 MYL12AP19105 171 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF280AP59817 542 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 TSNQ15631 228 aaKnown RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 INO80DQ53TQ3 878 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 PRRT2Q7Z6L0 340 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 ULK2Q8IYT8 1036 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 WDR55Q9H6Y2 383 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-204ENST00000400337 STMN3Q9NZ72 180 aa18.23■□□□□ 0.51
COL18A1-204ENST00000400337 FOXO6A8MYZ6 492 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 LRIG2O94898 1065 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 ELFN1P0C7U0 828 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 GNA13Q14344 377 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 HECTD2Q5U5R9 776 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 DHDDSQ86SQ9 333 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 CHPFQ8IZ52 775 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 IRGQQ8WZA9 623 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 CXorf40BQ96DE9 158 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms