RNA–Protein interactions for RNA: ENST00000399753.2

MSRB1-202, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-202ENST00000399753 NOCTQ9UK39 431 aaKnown RBP17.21■□□□□ 0.35
MSRB1-202ENST00000399753 TMEM202A6NGA9 273 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 CD82P27701 267 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 MMP12P39900 470 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 ARHGEF7Q14155 803 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 GRM3Q14832 879 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 PARP15Q460N3 678 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 COLEC12Q5KU26 742 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 PHF19Q5T6S3 580 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 BRAT1Q6PJG6 821 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 SLFN11Q7Z7L1 901 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 OR56A4Q8NGH8 313 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 SLC30A5Q8TAD4 765 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 HTR3CQ8WXA8 447 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 FUBP1Q96AE4 644 aaKnown RBP17.2■□□□□ 0.34
MSRB1-202ENST00000399753 ZNF641Q96N77 438 aaPredicted RBP17.2■□□□□ 0.34
MSRB1-202ENST00000399753 C11orf70Q9BRQ4 267 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 B3GNT4Q9C0J1 378 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 SEMA6CQ9H3T2 930 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 FGF22Q9HCT0 170 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 MRPL40Q9NQ50 206 aaKnown RBP17.2■□□□□ 0.34
MSRB1-202ENST00000399753 ATP8A1Q9Y2Q0 1164 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 LRRK1Q38SD2 2015 aa17.2■□□□□ 0.34
MSRB1-202ENST00000399753 B4DGG1 531 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 CACNB4O00305 520 aaPredicted RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 PES1O00541 588 aaKnown RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 NUDT21O43809 227 aaKnown RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 BUB1BO60566 1050 aaPredicted RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 PPFIA2O75334 1257 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 CHRNB2P17787 502 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 RFC1P35251 1148 aaPredicted RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 KIAA1024LP59773 190 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 CDR2Q01850 454 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 HSP90AA4PQ58FG1 418 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 CFAP58Q5T655 872 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 ZNF574Q6ZN55 896 aaPredicted RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 ZSWIM9Q86XI8 627 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 FUCA2Q9BTY2 467 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 TMEM168Q9H0V1 697 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 SLC25A18Q9H1K4 315 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 DPEP2Q9H4A9 486 aa17.19■□□□□ 0.34
MSRB1-202ENST00000399753 GEMIN8Q9NWZ8 242 aaKnown RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 UBA2Q9UBT2 640 aaPredicted RBP17.19■□□□□ 0.34
MSRB1-202ENST00000399753 CFAP69A5D8W1 941 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 WASH4PA8MWX3 477 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 TNFRSF10CO14798 259 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 RECQL5O94762 991 aaPredicted RBP17.18■□□□□ 0.34
MSRB1-202ENST00000399753 PRKCGP05129 697 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 KRT3P12035 628 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 KELP23276 732 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 B4GALNT1Q00973 533 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 FMO1Q01740 532 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 PTP4A2Q12974 167 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 CLCA4Q14CN2 919 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 C16orf72Q14CZ0 275 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 MAP9Q49MG5 647 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 EFHC2Q5JST6 749 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 TMEM164Q5U3C3 297 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 SPECC1LQ69YQ0 1117 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 CAMK1DQ8IU85 385 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 UMODL1-AS1Q8N2C9 162 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 TUBGCP5Q96RT8 1024 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 PDFQ9HBH1 243 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 FLNCQ14315 2725 aa17.18■□□□□ 0.34
MSRB1-202ENST00000399753 B4GAT1O43505 415 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 CREB3O43889 395 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 GFPT2O94808 682 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 CPNE6O95741 557 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 HOXC4P09017 264 aaPredicted RBP17.17■□□□□ 0.34
MSRB1-202ENST00000399753 GPD1P21695 349 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 TRIM23P36406 574 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 BECN1Q14457 450 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 WDR59Q6PJI9 974 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 PIM3Q86V86 326 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 CCL4L1Q8NHW4 92 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 CATSPERBQ9H7T0 1116 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 RDH14Q9HBH5 336 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 CYP4F12Q9HCS2 524 aa17.17■□□□□ 0.34
MSRB1-202ENST00000399753 AKAP7Q9P0M2 348 aaPredicted RBP17.17■□□□□ 0.34
MSRB1-202ENST00000399753 J3KR12 359 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 CCL4P13236 92 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 GSCP56915 257 aaPredicted RBP17.16■□□□□ 0.34
MSRB1-202ENST00000399753 TLE1Q04724 770 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 RALGDSQ12967 914 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 AMZ1Q400G9 498 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 SCYL2Q6P3W7 929 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 LIPIQ6XZB0 460 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 TRIM72Q6ZMU5 477 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 KIAA1524Q8TCG1 905 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 JPH3Q8WXH2 748 aaPredicted RBP17.16■□□□□ 0.34
MSRB1-202ENST00000399753 LGR4Q9BXB1 951 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 SLC12A9Q9BXP2 914 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 DOPEY2Q9Y3R5 2298 aa17.16■□□□□ 0.34
MSRB1-202ENST00000399753 STMND1H3BQB6 276 aa17.15■□□□□ 0.34
MSRB1-202ENST00000399753 PRAMEF11O60813 436 aa17.15■□□□□ 0.34
MSRB1-202ENST00000399753 ELFN1P0C7U0 828 aa17.15■□□□□ 0.34
MSRB1-202ENST00000399753 UNGP13051 313 aaPredicted RBP17.15■□□□□ 0.34
MSRB1-202ENST00000399753 SERPINA4P29622 427 aa17.15■□□□□ 0.34
MSRB1-202ENST00000399753 STAT1P42224 750 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms