RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ZNF558Q96NG5 402 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 FAM86C2PA6NEL3 165 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 RFXANKO14593 260 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 RSL1D1O76021 490 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 IL1BP01584 269 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 LINC00032P0C843 101 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 PPIBP23284 216 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 CEBPGP53567 150 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 ATXN1P54253 815 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 DLG1Q12959 904 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 IL18Q14116 193 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 MSANTD1Q6ZTZ1 278 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 OR5T3Q8NGG3 340 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 SETD6Q8TBK2 473 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 RDH11Q8TC12 318 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 CCDC115Q96NT0 180 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 EHD4Q9H223 541 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 ANKZF1Q9H8Y5 726 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 IQGAP3Q86VI3 1631 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 GMFGO60234 142 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 HOXC12P31275 282 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 AKR1D1P51857 326 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 C18orf25Q96B23 403 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 L2HGDHQ9H9P8 463 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 PCDHGB3Q9Y5G1 929 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 A0A087X0B3 334 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 H3BQF6 201 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 UGT2B11O75310 529 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 LRIG2O94898 1065 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 CCNB1P14635 433 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 ADRA1DP25100 572 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 NRG3P56975 720 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 CEP68Q76N32 757 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 FAR1Q8WVX9 515 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 ACKR2O00590 384 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ATP4AP20648 1035 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ADORA2AP29274 412 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 SENP8Q96LD8 212 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 EXD2Q9NVH0 621 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 MRPS33Q9Y291 106 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 GRIP1Q9Y3R0 1128 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 LOC110117498-PIK3R3F6TDL0 507 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 GSTT1P30711 240 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 CDK9P50750 372 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 MANFP55145 182 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ZPBP2Q6X784 338 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 GPR180Q86V85 440 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 PARP8Q8N3A8 854 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 PIK3C3Q8NEB9 887 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 GAL3ST3Q96A11 431 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 CERS2Q96G23 380 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 PDCD2LQ9BRP1 358 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 TDRD1Q9BXT4 1180 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 CST11Q9H112 138 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 DNAJC18Q9H819 358 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 PNPLA3Q9NST1 481 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 RAPGEFL1Q9UHV5 662 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 TBC1D24Q9ULP9 559 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 LRATO95237 230 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 NR2F6P10588 404 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 CYP4B1P13584 511 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ARF3P61204 181 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ARF1P84077 181 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 SLC25A3Q00325 362 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 PPATQ06203 517 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ACVR2BQ13705 512 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 SNAP47Q5SQN1 464 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 GPR107Q5VW38 600 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 SFRP1Q8N474 314 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ADCY4Q8NFM4 1077 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 PMM1Q92871 262 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 OR52E6Q96RD3 313 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ADAM2Q99965 735 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 OSBPL11Q9BXB4 747 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 CACNB4O00305 520 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 DHFRP00374 187 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 TFEBP19484 476 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 GPD2P43304 727 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 DNASE1L1P49184 302 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ELF3P78545 371 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ITGB3BPQ13352 177 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 OLFML1Q6UWY5 402 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 CHSY3Q70JA7 882 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 GALNTL5Q7Z4T8 443 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 HJURPQ8NCD3 748 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 C5orf34Q96MH7 638 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 INO80Q9ULG1 1556 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 FAM237BA0A1B0GVD1 139 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 ZNF208O43345 1280 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 CHKAP35790 457 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 PSEN1P49768 467 aa12.34□□□□□ -0.43
CACNA1C-219ENST00000399649 FAM91A1Q658Y4 838 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms