RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TOP3BO95985 862 aaKnown RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 CCNFP41002 786 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 NDUFV1P49821 464 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 FGD3Q5JSP0 725 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 LDLRAP1Q5SW96 308 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 SATL1Q86VE3 508 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 TMEM192Q8IY95 271 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 CLYBLQ8N0X4 340 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 MPP5Q8N3R9 675 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 TERB1Q8NA31 727 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 LENG1Q96BZ8 264 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 KLRG1Q96E93 195 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 MIEF1Q9NQG6 463 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ARHGEF4Q9NR80 690 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ABCC13Q9NSE7 274 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 PRKAG3Q9UGI9 489 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 HMGXB4Q9UGU5 601 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 NEMP2A6NFY4 417 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 DBTP11182 482 aaKnown RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CYP4B1P13584 511 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 RPS7P62081 194 aaKnown RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 LSM12Q3MHD2 195 aaKnown RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 VPS26BQ4G0F5 336 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 DGKKQ5KSL6 1271 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 RETSATQ6NUM9 610 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 RNF180Q86T96 592 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF567Q8N184 647 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 SLC35B2Q8TB61 432 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 FAM81AQ8TBF8 368 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CLEC4CQ8WTT0 213 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 MYLPFQ96A32 169 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 PHF21AQ96BD5 680 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 OSBPL11Q9BXB4 747 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 DPEP3Q9H4B8 488 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 STN1Q9H668 368 aaKnown RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CLK4Q9HAZ1 481 aaKnown RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 PNPLA3Q9NST1 481 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 SLC27A5Q9Y2P5 690 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 FADS3Q9Y5Q0 445 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 A0A0J9YYE9 177 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 LRATO95237 230 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CHRNGP07510 517 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 PSMD7P51665 324 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CYP4F2P78329 520 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CYP4F3Q08477 520 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 ACSM2AQ08AH3 577 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CAMK2GQ13555 558 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF284Q2VY69 593 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 TTC23Q5W5X9 447 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 ACSM2BQ68CK6 577 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 ESRP1Q6NXG1 681 aaKnown RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 USP50Q70EL3 339 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 DENND6AQ8IWF6 608 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CLHC1Q8NHS4 586 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 ESAMQ96AP7 390 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 TEKT5Q96M29 485 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 SYT11Q9BT88 431 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 MRPS26Q9BYN8 205 aaKnown RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CAB39Q9Y376 341 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 TTLL13PA6NNM8 815 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 MED26O95402 600 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 PGK1P00558 417 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 WNT7BP56706 349 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 SPIDRQ14159 915 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CRY1Q16526 586 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 PLPPR4Q7Z2D5 763 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 OFCC1Q8IZS5 231 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 OLIG1Q8TAK6 271 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 APOL4Q9BPW4 351 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 TSEN34Q9BSV6 310 aaKnown RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 DUSP16Q9BY84 665 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 ASB8Q9H765 288 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 HMG20AQ9NP66 347 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 CACNG4Q9UBN1 327 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 LEF1Q9UJU2 399 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-204ENST00000397545 KCNH4Q9UQ05 1017 aa10.8□□□□□ -0.68
CCDC40-204ENST00000397545 C2CD4BA6NLJ0 364 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 MDM4O15151 490 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TRIM24O15164 1050 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 IDH3AP50213 366 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 FBXW4P57775 412 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 USP46P62068 366 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 SREBF2Q12772 1141 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CNTN1Q12860 1018 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ARMCX4Q5H9R4 360 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 SPANXN2Q5MJ10 180 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 PPP1R15BQ5SWA1 713 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 GPR158Q5T848 1215 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CWF19L1Q69YN2 538 aaKnown RBP10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CHADLQ6NUI6 762 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 DEFB128Q7Z7B8 93 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF467Q7Z7K2 595 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-204ENST00000397545 FAM35AQ86V20 835 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 SYT12Q8IV01 421 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CFAP52Q8N1V2 620 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF570Q96NI8 536 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 OSGEPL1Q9H4B0 414 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 GLOD4Q9HC38 313 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CDH9Q9ULB4 789 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms