RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 hCG_2014768A0A024R1R8 64 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 MTMR11A4FU01 709 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 ZNF682O95780 498 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 EOMESO95936 686 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 EPHX1P07099 455 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 KCNE1P15382 129 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 LPOP22079 712 aaPredicted RBP11.21□□□□□ -0.62
IFT140-202ENST00000397417 RAB10P61026 200 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 ABCE1P61221 599 aaKnown RBP11.21□□□□□ -0.62
IFT140-202ENST00000397417 SNRPD1P62314 119 aaKnown RBP11.21□□□□□ -0.62
IFT140-202ENST00000397417 CDK16Q00536 496 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 FASTKQ14296 549 aaKnown RBP11.21□□□□□ -0.62
IFT140-202ENST00000397417 DNAL1Q4LDG9 190 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 RARS2Q5T160 578 aaKnown RBP11.21□□□□□ -0.62
IFT140-202ENST00000397417 PKN3Q6P5Z2 889 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 GRASPQ7Z6J2 395 aaPredicted RBP11.21□□□□□ -0.62
IFT140-202ENST00000397417 SPNS2Q8IVW8 549 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 CNBD2Q96M20 576 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 TEKT5Q96M29 485 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 RHBGQ9H310 441 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 EFCAB1Q9HAE3 211 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 PSMD13Q9UNM6 376 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 LAMB2P55268 1798 aa11.21□□□□□ -0.62
IFT140-202ENST00000397417 COL2A1P02458 1487 aaPredicted RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 RNASEH1O60930 286 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 AP2A1O95782 977 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CLTBP09497 229 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 HAPLN1P10915 354 aaPredicted RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 ACADMP11310 421 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CCR10P46092 362 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 GPX6P59796 221 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 NTHL1P78549 312 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 SGCGQ13326 291 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 XRCC4Q13426 336 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 PIM3Q86V86 326 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 FITM2Q8N6M3 262 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 FAM156AQ8NDB6 213 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 SH3RF2Q8TEC5 729 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 SORCS1Q8WY21 1168 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 FAM162AQ96A26 154 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 PYCR2Q96C36 320 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 FEM1CQ96JP0 617 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 TBC1D10AQ9BXI6 508 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 NFKBIZQ9BYH8 718 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 TLL2Q9Y6L7 1015 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CNOT1A5YKK6 2376 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 BCLAF3A2AJT9 711 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 SIX3O95343 332 aaPredicted RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 LMNAP02545 664 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 CHRNGP07510 517 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 IL10P22301 178 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CAMK2GQ13555 558 aaPredicted RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 LAMB3Q13751 1172 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 OASLQ15646 514 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 PREPLQ4J6C6 727 aaPredicted RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 LRRC23Q53EV4 343 aaPredicted RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 LACTB2Q53H82 288 aaPredicted RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 DDX60LQ5H9U9 1706 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 TMEM198Q66K66 360 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CES5AQ6NT32 575 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CXorf38Q8TB03 319 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 STK32AQ8WU08 396 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 NUP205Q92621 2012 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.62
IFT140-202ENST00000397417 EBF4Q9BQW3 602 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 ATP13A3Q9H7F0 1226 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 DLGAP2Q9P1A6 1054 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 EGFL7Q9UHF1 273 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 PGAP2Q9UHJ9 254 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 RREB1Q92766 1687 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 SEC16AO15027 2179 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CEP250Q9BV73 2442 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 C2orf78A6NCI8 922 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 EIF2S1P05198 315 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 LTA4HP09960 611 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 GLDCP23378 1020 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 GPC1P35052 558 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 RAP1GDS1P52306 607 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 HADHBP55084 474 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 INCA1Q0VD86 236 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 PRKAA1Q13131 559 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 STXBP5Q5T5C0 1151 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CPNE9Q8IYJ1 553 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 RTL3Q8N8U3 475 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 HJURPQ8NCD3 748 aaPredicted RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 PPP1R10Q96QC0 940 aaKnown RBP11.2□□□□□ -0.62
IFT140-202ENST00000397417 CAAP1Q9H8G2 361 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 RIC8BQ9NVN3 520 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 KIF17Q9P2E2 1029 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 CDK5RAP2Q96SN8 1893 aa11.2□□□□□ -0.62
IFT140-202ENST00000397417 NPEPPSL1A6NEC2 478 aa11.19□□□□□ -0.62
IFT140-202ENST00000397417 TRPC5OSA6NMA1 111 aa11.19□□□□□ -0.62
IFT140-202ENST00000397417 TMCC1O94876 653 aa11.19□□□□□ -0.62
IFT140-202ENST00000397417 KRT16P08779 473 aa11.19□□□□□ -0.62
IFT140-202ENST00000397417 CYBAP13498 195 aa11.19□□□□□ -0.62
IFT140-202ENST00000397417 CSKP41240 450 aa11.19□□□□□ -0.62
IFT140-202ENST00000397417 SPRED3Q2MJR0 410 aa11.19□□□□□ -0.62
IFT140-202ENST00000397417 ARL13AQ5H913 290 aaPredicted RBP11.19□□□□□ -0.62
IFT140-202ENST00000397417 UGT3A1Q6NUS8 523 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms