RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 NPC1O15118 1278 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 CPP00450 1065 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 CTSLP07711 333 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 GPX6P59796 221 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 E2F5Q15329 346 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 OTOGLQ3ZCN5 2332 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 ARMC12Q5T9G4 340 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 ZNF513Q8N8E2 541 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 LPCAT1Q8NF37 534 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 PDCD6IPQ8WUM4 868 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 PIH1D2Q8WWB5 315 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 ECHDC3Q96DC8 303 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 ZNF641Q96N77 438 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 TTC25Q96NG3 672 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 TRIM56Q9BRZ2 755 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 ADGRE3Q9BY15 652 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 SUV39H2Q9H5I1 410 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 IL36AQ9UHA7 158 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 PCDHB9Q9Y5E1 797 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 PCDHGA2Q9Y5H1 932 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 STON1Q9Y6Q2 735 aa17.04■□□□□ 0.32
TSPAN4-205ENST00000397406 SCN8AQ9UQD0 1980 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 ZNF292O60281 2723 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 EP300Q09472 2414 aaPredicted RBP17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 ANKRD66B4E2M5 251 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 SIN3BO75182 1162 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 TSHRP16473 764 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 TIE1P35590 1138 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 SEC13P55735 322 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 RPL26P61254 145 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 GRSF1Q12849 480 aaKnown RBP eCLIP17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 QPCTQ16769 361 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 STEAP4Q687X5 459 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 DENND2CQ68D51 928 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 HDXQ7Z353 690 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 ZSWIM9Q86XI8 627 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 KCNV2Q8TDN2 545 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 SPOCK2Q92563 424 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 ZC3H7BQ9UGR2 993 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 SOX13Q9UN79 622 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 RPL26L1Q9UNX3 145 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 MAD1L1Q9Y6D9 718 aa17.03■□□□□ 0.32
TSPAN4-205ENST00000397406 DMXL1Q9Y485 3027 aa17.02■□□□□ 0.32
TSPAN4-205ENST00000397406 MAP2K7O14733 419 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 LEFTY1O75610 366 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 ACSL3O95573 720 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 UGT2B4P06133 528 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 ABHD2P08910 425 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 SSTR1P30872 391 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 GRIA4P48058 902 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 SLC29A2Q14542 456 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 POU6F1Q14863 301 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 ARSIQ5FYB1 569 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 PCID2Q5JVF3 399 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 ARMC3Q5W041 872 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 CASC4Q6P4E1 433 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 ZC3H14Q6PJT7 736 aaKnown RBP17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 GDPD4Q6W3E5 623 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 UNC5AQ6ZN44 842 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 CCNJLQ8IV13 435 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 PALM2Q8IXS6 379 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 CHPFQ8IZ52 775 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 STK40Q8N2I9 435 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 SPEM1Q8N4L4 309 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 GRIN3AQ8TCU5 1115 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 RMDN1Q96DB5 314 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 CFAP36Q96G28 342 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 LRIG1Q96JA1 1093 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 SMIM14Q96QK8 99 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 RANBP9Q96S59 729 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 FAM129BQ96TA1 746 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 NAT9Q9BTE0 207 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 KIFC1Q9BW19 673 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 SAMD15Q9P1V8 674 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 SUN2Q9UH99 717 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 TCAF1Q9Y4C2 921 aa17.02■□□□□ 0.31
TSPAN4-205ENST00000397406 FAM237BA0A1B0GVD1 139 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 MAGEB16A2A368 324 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 SASH3O75995 380 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 PRKCGP05129 697 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 EPHX1P07099 455 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 PGAM1P18669 254 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 ADRA1DP25100 572 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 SLC8A1P32418 973 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 ELAVL3Q14576 367 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 CAPN12Q6ZSI9 719 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 TMEM135Q86UB9 458 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 IQCKQ8N0W5 287 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 PTCD2Q8WV60 388 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 OR8D1Q8WZ84 308 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 KLHL32Q96NJ5 620 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 GABRG3Q99928 467 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 OSBPL1AQ9BXW6 950 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 MRM3Q9HC36 420 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 PRSS16Q9NQE7 514 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 CHRAC1Q9NRG0 131 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 SPO11Q9Y5K1 396 aa17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 ZNF106Q9H2Y7 1883 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-205ENST00000397406 A0A1W2PQ67 120 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms