RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TRIM49D1C9J1S8 452 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 K7EQS6 105 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 KRT38O76015 456 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 EGFP01133 1207 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 SEC13P55735 322 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 ITKQ08881 620 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 DNAJC3Q13217 504 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 ZNF234Q14588 700 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 SPANXN3Q5MJ09 141 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 RNF187Q5TA31 235 aaPredicted RBP15.02□□□□□ -0.01
CAPN3-207ENST00000397200 TRPM8Q7Z2W7 1104 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 CTAGE3PQ8IX95 158 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 C10orf67Q8IYJ2 551 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 CNTD1Q8N815 330 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 KDM1BQ8NB78 822 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 LRRC8CQ8TDW0 803 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 ZNF419Q96HQ0 510 aaPredicted RBP15.02□□□□□ -0.01
CAPN3-207ENST00000397200 NECAB3Q96P71 396 aaPredicted RBP15.02□□□□□ -0.01
CAPN3-207ENST00000397200 PSKH2Q96QS6 385 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 CEP44Q9C0F1 390 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 POLR1EQ9GZS1 481 aaKnown RBP15.02□□□□□ -0.01
CAPN3-207ENST00000397200 SYBUQ9NX95 663 aa15.02□□□□□ -0.01
CAPN3-207ENST00000397200 THAP10Q9P2Z0 257 aaPredicted RBP15.02□□□□□ -0.01
CAPN3-207ENST00000397200 SHISA7A6NL88 538 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 ATP9BO43861 1147 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 UGT1A9O60656 530 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 IL1BP01584 269 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 PYGBP11216 843 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 CD72P21854 359 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 DLG2Q15700 870 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 EGFLAMQ63HQ2 1017 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 C22orf39Q6P5X5 142 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 PGBD5Q8N414 524 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 PCDH20Q8N6Y1 951 aaKnown RBP15.01□□□□□ -0.01
CAPN3-207ENST00000397200 ZNF513Q8N8E2 541 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-207ENST00000397200 SPOCK2Q92563 424 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 ZNF75CPQ92670 426 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-207ENST00000397200 EZH1Q92800 747 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-207ENST00000397200 ISG20Q96AZ6 181 aaKnown RBP15.01□□□□□ -0.01
CAPN3-207ENST00000397200 MYO19Q96H55 970 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 KLF6Q99612 283 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-207ENST00000397200 PITPNM3Q9BZ71 974 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 UGT1A7Q9HAW7 530 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 UGT1A10Q9HAW8 530 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 UGT1A8Q9HAW9 530 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 GLOD4Q9HC38 313 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 SLC17A7Q9P2U7 560 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 LHX3Q9UBR4 397 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 NDRG2Q9UN36 371 aaKnown RBP15.01□□□□□ -0.01
CAPN3-207ENST00000397200 SLC12A4Q9UP95 1085 aa15.01□□□□□ -0.01
CAPN3-207ENST00000397200 MRPS17Q9Y2R5 130 aaKnown RBP15.01□□□□□ -0.01
CAPN3-207ENST00000397200 KRBA1A5PL33 1030 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 TTC34A8MYJ7 566 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 F5H423 210 aaPredicted RBP15□□□□□ -0.01
CAPN3-207ENST00000397200 GOLGA8RI6L899 631 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 NPC1O15118 1278 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 MUSKO15146 869 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 HNRNPLP14866 589 aaKnown RBP eCLIP15□□□□□ -0.01
CAPN3-207ENST00000397200 NFKB1P19838 968 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 TIE1P35590 1138 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 LIG3P49916 1009 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 SESN2P58004 480 aaPredicted RBP15□□□□□ -0.01
CAPN3-207ENST00000397200 MAXP61244 160 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 FBXO43Q4G163 708 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 SERPINA13PQ6UXR4 307 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 TMEM135Q86UB9 458 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 SIX5Q8N196 739 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15□□□□□ -0.01
CAPN3-207ENST00000397200 EXOC2Q96KP1 924 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 PAIP2Q9BPZ3 127 aaKnown RBP15□□□□□ -0.01
CAPN3-207ENST00000397200 MGME1Q9BQP7 344 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 TM6SF2Q9BZW4 377 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 TNKS2Q9H2K2 1166 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 HCN2Q9UL51 889 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 PHTF1Q9UMS5 762 aa15□□□□□ -0.01
CAPN3-207ENST00000397200 AP3B1O00203 1094 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 PSMD3O43242 534 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 IGSF6O95976 241 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 GSRP00390 522 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 KIR2DL1P43626 348 aaPredicted RBP14.99□□□□□ -0.01
CAPN3-207ENST00000397200 STARD6P59095 220 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 SNRPD1P62314 119 aaKnown RBP14.99□□□□□ -0.01
CAPN3-207ENST00000397200 CRADDP78560 199 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 NSUN2Q08J23 767 aaKnown RBP eCLIP14.99□□□□□ -0.01
CAPN3-207ENST00000397200 GALNTL6Q49A17 601 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 C2orf27AQ580R0 203 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 DGKKQ5KSL6 1271 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 OR52K1Q8NGK4 314 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 KCNV2Q8TDN2 545 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 CDKL2Q92772 493 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 SLC25A51Q9H1U9 297 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 RASSF4Q9H2L5 321 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 LRRC40Q9H9A6 602 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 ABCF3Q9NUQ8 709 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 ANTXRLA6NF34 631 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 KLF11O14901 512 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 BNIP3LO60238 219 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 ZNF821O75541 412 aaPredicted RBP14.99□□□□□ -0.01
CAPN3-207ENST00000397200 USP1O94782 785 aa14.99□□□□□ -0.01
CAPN3-207ENST00000397200 POLBP06746 335 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms