RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CPB1P15086 417 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 BDNFP23560 247 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 VARSP26640 1264 aaKnown RBP13.99□□□□□ -0.17
NUP98-204ENST00000397004 EIF4EBP2Q13542 120 aaPredicted RBP13.99□□□□□ -0.17
NUP98-204ENST00000397004 SQLEQ14534 574 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 VPS26BQ4G0F5 336 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 NOTUMQ6P988 496 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 RANBP10Q6VN20 620 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 ERMP1Q7Z2K6 904 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 TEX37Q96LM6 180 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 SYT17Q9BSW7 474 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 CMTM6Q9NX76 183 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 MID2Q9UJV3 735 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 DNAJC15Q9Y5T4 150 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 OR51F1A6NGY5 319 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 H0Y858 1186 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 HUS1O60921 280 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 GJB3O75712 270 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 BMP10O95393 424 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 KCNE1P15382 129 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 SOX11P35716 441 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 ZBTB46Q86UZ6 589 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 OR13J1Q8NGT2 312 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 TOP1MTQ969P6 601 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 TNIP3Q96KP6 325 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 KCNA7Q96RP8 456 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 NPLQ9BXD5 320 aaPredicted RBP13.99□□□□□ -0.17
NUP98-204ENST00000397004 SLC39A8Q9C0K1 460 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 WDCPQ9H6R7 721 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 CLK4Q9HAZ1 481 aaKnown RBP13.99□□□□□ -0.17
NUP98-204ENST00000397004 TLR9Q9NR96 1032 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 ARMC1Q9NVT9 282 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 BOLA2-SMG1P6H3BVE0 249 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 MMP3P08254 477 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 ARSDP51689 593 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 SH3BGRP55822 239 aaPredicted RBP13.99□□□□□ -0.17
NUP98-204ENST00000397004 FAM45BPQ6NSW5 357 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 SLC15A3Q8IY34 581 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 FAM45AQ8TCE6 357 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 NSUN5Q96P11 429 aaKnown RBP13.99□□□□□ -0.17
NUP98-204ENST00000397004 TSGA13Q96PP4 275 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 AKTIPQ9H8T0 292 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 AGPAT4Q9NRZ5 378 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 RRN3Q9NYV6 651 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 PIN4Q9Y237 131 aaKnown RBP13.99□□□□□ -0.17
NUP98-204ENST00000397004 TRAF6Q9Y4K3 522 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 SIX3O95343 332 aaPredicted RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 CES1P23141 567 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 GJA5P36382 358 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 ISCA2Q86U28 154 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 CLVS1Q8IUQ0 354 aaPredicted RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 OFCC1Q8IZS5 231 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 EMID1Q96A84 441 aaPredicted RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 IL12RB2Q99665 862 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 MED10Q9BTT4 135 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 CCM2LQ9NUG4 571 aaPredicted RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 MARCH4Q9P2E8 410 aaPredicted RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 HTTP42858 3142 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 PLXNB2O15031 1838 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 ASPDHA6ND91 283 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 YAP1P46937 504 aaKnown RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 UNC50Q53HI1 259 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 FBXO48Q5FWF7 155 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 FGD3Q5JSP0 725 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 TBPL2Q6SJ96 375 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 Q6ZNX1 250 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 PPWD1Q96BP3 646 aaKnown RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 BIRC8Q96P09 236 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 SIK2Q9H0K1 926 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 GLOD4Q9HC38 313 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 ARHGEF38Q9NXL2 777 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 SLAMF8Q9P0V8 285 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 CROTQ9UKG9 612 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 IPPQ9Y573 584 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 RBM47A0AV96 593 aaKnown RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 B4GAT1O43505 415 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 SEC24DO94855 1032 aaPredicted RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 FAM163BP0C2L3 166 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 CD151P48509 253 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 STX5Q13190 355 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 POLD3Q15054 466 aaPredicted RBP13.98□□□□□ -0.17
NUP98-204ENST00000397004 GPR158Q5T848 1215 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 ANKRD23Q86SG2 305 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 DHFR2Q86XF0 187 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 OR2T34Q8NGX1 318 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 OR2T3Q8NH03 318 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 ADAMTS16Q8TE57 1224 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 FCRL5Q96RD9 977 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 SLC38A7Q9NVC3 462 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 ABCD2Q9UBJ2 740 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 KCTD3Q9Y597 815 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 RAD54BQ9Y620 910 aa13.98□□□□□ -0.17
NUP98-204ENST00000397004 MT-ND1P03886 318 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 MTHFD1P11586 935 aaKnown RBP13.97□□□□□ -0.17
NUP98-204ENST00000397004 ZFP36L2P47974 494 aaKnown RBP13.97□□□□□ -0.17
NUP98-204ENST00000397004 SLC36A3Q495N2 470 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 INTS6LQ5JSJ4 861 aaKnown RBP13.97□□□□□ -0.17
NUP98-204ENST00000397004 SHCBP1Q8NEM2 672 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 DNAJB3Q8WWF6 145 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 RTP3Q9BQQ7 232 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms