RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MAP4P27816 1152 aaKnown RBP8.48□□□□□ -1.05
SCFD1-202ENST00000396629 OAS2P29728 719 aaKnown RBP8.48□□□□□ -1.05
SCFD1-202ENST00000396629 ALDH4A1P30038 563 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 TSPAN7P41732 249 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 GPR3P46089 330 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 GABRB2P47870 512 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 MAZP56270 477 aaKnown RBP8.48□□□□□ -1.05
SCFD1-202ENST00000396629 GJB7Q6PEY0 223 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 LEKR1Q6ZMV7 388 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 OR4D9Q8NGE8 314 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 CASKIN2Q8WXE0 1202 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 SHC3Q92529 594 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 HMCESQ96FZ2 354 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 SYNCQ9H7C4 482 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 GPN2Q9H9Y4 310 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-202ENST00000396629 MRPL40Q9NQ50 206 aaKnown RBP8.48□□□□□ -1.05
SCFD1-202ENST00000396629 SPATS2LQ9NUQ6 558 aaKnown RBP8.48□□□□□ -1.05
SCFD1-202ENST00000396629 SLC39A1Q9NY26 324 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 TEP1Q99973 2627 aaKnown RBP8.48□□□□□ -1.05
SCFD1-202ENST00000396629 CREBBPQ92793 2442 aa8.48□□□□□ -1.05
SCFD1-202ENST00000396629 CFAP69A5D8W1 941 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 ZSCAN5CA6NGD5 496 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 RHPN2P1A8MT19 583 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 CACNB4O00305 520 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 IGSF6O95976 241 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 FGF1P05230 155 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 PRKAR1AP10644 381 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 THRAP10827 490 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 CD44P16070 742 aaKnown RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 XPAP23025 273 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 KELP23276 732 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 TRIM23P36406 574 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 USP8P40818 1118 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 STAT1P42224 750 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 LIG3P49916 1009 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 MLLT10P55197 1068 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 RAB15P59190 212 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 MC1RQ01726 317 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 STIM1Q13586 685 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 UGP2Q16851 508 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 DEFB109BQ30KR1 87 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 INO80DQ53TQ3 878 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 DCAF12Q5T6F0 453 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 FHL5Q5TD97 284 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 CAPRIN2Q6IMN6 1127 aaKnown RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 TRNP1Q6NT89 227 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 NRROSQ86YC3 692 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 BMPERQ8N8U9 685 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 TEFMQ96QE5 360 aaKnown RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 DPYSL5Q9BPU6 564 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 PCDH12Q9NPG4 1184 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 OCIAD1Q9NX40 245 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 DNAI1Q9UI46 699 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 NEU3Q9UQ49 428 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 TP53TG5Q9Y2B4 290 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 ITPR2Q14571 2701 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 INSIG1O15503 277 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 BUB1O43683 1085 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 AGFG2O95081 481 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 SMC2O95347 1197 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 GNA14O95837 355 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 KRT7P08729 469 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 CCNB1P14635 433 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 BMP6P22004 513 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 CDH5P33151 784 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 CSTF2P33240 577 aaKnown RBP eCLIP8.47□□□□□ -1.056e-6■■□□□ 13.8
SCFD1-202ENST00000396629 KRT9P35527 623 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 FLT3P36888 993 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 MMP12P39900 470 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 PPP1R2P41236 205 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 UQCRFS1P47985 274 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 PTK2Q05397 1052 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 ABHD18Q0P651 414 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 SEPT6Q14141 434 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 TRIM65Q6PJ69 517 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 FAM131BQ86XD5 332 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 XYLT1Q86Y38 959 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 NLGN4XQ8N0W4 816 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 FMR1NBQ8N0W7 255 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 GALNT11Q8NCW6 608 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 NLGN4YQ8NFZ3 816 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 SSC4DQ8WTU2 575 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 ZDHHC1Q8WTX9 485 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 KIAA1143Q96AT1 154 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 SUV39H2Q9H5I1 410 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 CYP4F12Q9HCS2 524 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 PDP2Q9P2J9 529 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 LHX3Q9UBR4 397 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 OR12D3Q9UGF7 316 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 TMEM59LQ9UK28 342 aa8.47□□□□□ -1.05
SCFD1-202ENST00000396629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCFD1-202ENST00000396629 ZNF106Q9H2Y7 1883 aaKnown RBP8.46□□□□□ -1.05
SCFD1-202ENST00000396629 IGHV1OR21-1A0A087WYE8 117 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 PRSS38A1L453 326 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 EFCAB7A8K855 629 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 K7EM74 188 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 RAMP2O60895 175 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 PIGNO95427 931 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 ECEL1O95672 775 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms