RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 ZIC3O60481 467 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 MTA2O94776 668 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 MMP2P08253 660 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 CYC1P08574 325 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 ELF1P32519 619 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 ICAM3P32942 547 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 CPOXP36551 454 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 EIF2S3P41091 472 aaKnown RBP4.23□□□□□ -1.73
CMC1-202ENST00000396610 RGS2P41220 211 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 GABRB2P47870 512 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 GNAQP50148 359 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 CCR9P51686 369 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 EIF3BP55884 814 aaKnown RBP4.23□□□□□ -1.73
CMC1-202ENST00000396610 DSCR9P59020 149 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 MPP1Q00013 466 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 DDR1Q08345 913 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 DHX34Q14147 1143 aaKnown RBP4.23□□□□□ -1.73
CMC1-202ENST00000396610 COL28A1Q2UY09 1125 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 SETMARQ53H47 684 aaPredicted RBP4.23□□□□□ -1.73
CMC1-202ENST00000396610 FAM69BQ5VUD6 431 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 ZNF324BQ6AW86 544 aaPredicted RBP4.23□□□□□ -1.73
CMC1-202ENST00000396610 ANKRD54Q6NXT1 300 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 CPLX2Q6PUV4 134 aaKnown RBP4.23□□□□□ -1.73
CMC1-202ENST00000396610 KLHL24Q6TFL4 600 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 ATF7IPQ6VMQ6 1270 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 CREB3L2Q70SY1 520 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 MTSS1LQ765P7 747 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 ZBTB2Q8N680 514 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 SCCPDHQ8NBX0 429 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 BEST2Q8NFU1 509 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 HUS1BQ8NHY5 278 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 KCNG4Q8TDN1 519 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 LRFN5Q96NI6 719 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 ESRP2Q9H6T0 727 aaKnown RBP4.23□□□□□ -1.73
CMC1-202ENST00000396610 CD93Q9NPY3 652 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 SLC6A13Q9NSD5 602 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 SLC9A2Q9UBY0 812 aa4.23□□□□□ -1.73
CMC1-202ENST00000396610 SRRM3A6NNA2 597 aaPredicted RBP4.22□□□□□ -1.73
CMC1-202ENST00000396610 C4orf47A7E2U8 309 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 RTN3O95197 1032 aaPredicted RBP4.22□□□□□ -1.73
CMC1-202ENST00000396610 CD4P01730 458 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 SSTR2P30874 369 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 HNRNPH1P31943 449 aaKnown RBP4.22□□□□□ -1.73
CMC1-202ENST00000396610 CDAP32320 146 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 TRAF2Q12933 501 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 KEAP1Q14145 624 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 FGFBP1Q14512 234 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 EIF2S3LQ2VIR3 472 aaKnown RBP4.22□□□□□ -1.73
CMC1-202ENST00000396610 PAPPA-AS1Q5QFB9 102 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 NADSYN1Q6IA69 706 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 B3GNT6Q6ZMB0 384 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 LINGO2Q7L985 606 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 RBM23Q86U06 439 aaKnown RBP4.22□□□□□ -1.73
CMC1-202ENST00000396610 ZC3HC1Q86WB0 502 aaKnown RBP4.22□□□□□ -1.73
CMC1-202ENST00000396610 PAF1Q8N7H5 531 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 AGBL3Q8NEM8 1001 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 NUDCD2Q8WVJ2 157 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 WASF1Q92558 559 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 GTF3C6Q969F1 213 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 ZNF570Q96NI8 536 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 HAUS8Q9BT25 410 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 TM6SF1Q9BZW5 370 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 SELENONQ9NZV5 590 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 ZNF580Q9UK33 172 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 INTS6Q9UL03 887 aaKnown RBP4.22□□□□□ -1.73
CMC1-202ENST00000396610 STON1Q9Y6Q2 735 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 CKAP5Q14008 2032 aa4.22□□□□□ -1.73
CMC1-202ENST00000396610 A0A0U1RQJ8 604 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 hDV102S1A0JD36 115 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 CPED1A4D0V7 1026 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 TMEM202A6NGA9 273 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 TTC36A6NLP5 189 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 LRRC53A6NM62 1247 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 B4E171 279 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 USP17L23D6RBM5 183 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 SEC14L5O43304 696 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 NDUFS7O75251 213 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 AFPP02771 609 aaKnown RBP4.21□□□□□ -1.74
CMC1-202ENST00000396610 G6PDP11413 515 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 UBL4AP11441 157 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 CD58P19256 250 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 GPTP24298 496 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 TSPAN7P41732 249 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 SEC61A1P61619 476 aaKnown RBP4.21□□□□□ -1.74
CMC1-202ENST00000396610 SORDQ00796 357 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 KIF5AQ12840 1032 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 GRSF1Q12849 480 aaKnown RBP eCLIP4.21□□□□□ -1.74
CMC1-202ENST00000396610 MYBPHQ13203 477 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 NFATC4Q14934 902 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 TBCEQ15813 527 aaPredicted RBP4.21□□□□□ -1.74
CMC1-202ENST00000396610 C2orf68Q2NKX9 166 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 XKR9Q5GH70 373 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 PPP6R3Q5H9R7 873 aaPredicted RBP4.21□□□□□ -1.74
CMC1-202ENST00000396610 RUSC1-AS1Q66K80 236 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 CDC73Q6P1J9 531 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.21□□□□□ -1.74
CMC1-202ENST00000396610 PGBD5Q8N414 524 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 RFFLQ8WZ73 363 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 CSF3RQ99062 836 aa4.21□□□□□ -1.74
CMC1-202ENST00000396610 MEIS3Q99687 375 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms