RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 USP4Q13107 963 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 MSLNQ13421 630 aaPredicted RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 E2F5Q15329 346 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 ARL13AQ5H913 290 aaPredicted RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 RBM20Q5T481 1227 aaKnown RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 RETSATQ6NUM9 610 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 CCDC149Q6ZUS6 474 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 AGAP11Q8TF27 550 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 UTP4Q969X6 686 aaKnown RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 CNDP1Q96KN2 507 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 TCF12Q99081 682 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 CCDC106Q9BWC9 280 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 MRGBPQ9NV56 204 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 SH3BP1Q9Y3L3 701 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 SCN5AQ14524 2016 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 DLX3O60479 287 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 GOT2P00505 430 aaKnown RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 ARSDP51689 593 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 TAF1AQ15573 450 aaPredicted RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 INO80DQ53TQ3 878 aaPredicted RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 AFTPHQ6ULP2 937 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 ARL5AQ9Y689 179 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 NDUFS3O75489 264 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 CKMP06732 381 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 CPA2P48052 419 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 DNAJB13P59910 316 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 RALGPS1Q5JS13 557 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 EPGNQ6UW88 154 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 NAPRTQ6XQN6 538 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 RAB44Q7Z6P3 723 aaPredicted RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 AGR3Q8TD06 166 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 SGF29Q96ES7 293 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 PRR11Q96HE9 360 aaPredicted RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 CDKN2AIPNLQ96HQ2 116 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 C11orf49Q9H6J7 331 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 SYTL2Q9HCH5 934 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
SNX6-202ENST00000396526 CRYL1Q9Y2S2 319 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 RAI2Q9Y5P3 530 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 NUMBLQ9Y6R0 609 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 TRPC5OSA6NMA1 111 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 SMIM24O75264 130 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 BAIAP3O94812 1187 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 TFEBP19484 476 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 LPOP22079 712 aaPredicted RBP16.19■□□□□ 0.18
SNX6-202ENST00000396526 COPAP53621 1224 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 RHOAP61586 193 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 DEFB103AP81534 67 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 PDAP1Q13442 181 aaKnown RBP16.19■□□□□ 0.18
SNX6-202ENST00000396526 HSF5Q4G112 596 aaPredicted RBP16.19■□□□□ 0.18
SNX6-202ENST00000396526 ARL14EPQ8N8R7 260 aaPredicted RBP16.19■□□□□ 0.18
SNX6-202ENST00000396526 LPCAT1Q8NF37 534 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 EXOC2Q96KP1 924 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 C2orf49Q9BVC5 232 aaPredicted RBP16.19■□□□□ 0.18
SNX6-202ENST00000396526 KCTD3Q9Y597 815 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 CCDC162PA2VCL2 907 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 STX7O15400 261 aaKnown RBP16.19■□□□□ 0.18
SNX6-202ENST00000396526 SLC4A1P02730 911 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 WDR5P61964 334 aaKnown RBP16.19■□□□□ 0.18
SNX6-202ENST00000396526 RINLQ6ZS11 566 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 TREML1Q86YW5 311 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 C1orf21Q9H246 121 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 POMKQ9H5K3 350 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 STOML2Q9UJZ1 356 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 CDYLQ9Y232 598 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 CPQQ9Y646 472 aa16.19■□□□□ 0.18
SNX6-202ENST00000396526 A8MUI8 341 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 TEX28O15482 410 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 BUD23O43709 281 aaKnown RBP16.18■□□□□ 0.18
SNX6-202ENST00000396526 MAGEC1O60732 1142 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 LUC7L3O95232 432 aaKnown RBP16.18■□□□□ 0.18
SNX6-202ENST00000396526 PIRTP0C851 137 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 CSF2RAP15509 400 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 GABRR2P28476 465 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 UBAP2LQ14157 1087 aaKnown RBP16.18■□□□□ 0.18
SNX6-202ENST00000396526 CCDC6Q16204 474 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 MICAL3Q7RTP6 2002 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 SPATA6LQ8N4H0 392 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 AUTS2Q8WXX7 1259 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 ZBED2Q9BTP6 218 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 DCLRE1BQ9H816 532 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 NLE1Q9NVX2 485 aaPredicted RBP16.18■□□□□ 0.18
SNX6-202ENST00000396526 GREB1Q4ZG55 1949 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 UBA6A0AVT1 1052 aaPredicted RBP16.18■□□□□ 0.18
SNX6-202ENST00000396526 ZBBXA8MT70 800 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 MATN2O00339 956 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 CCL22O00626 93 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 AURKAO14965 403 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 IPO13O94829 963 aaKnown RBP16.18■□□□□ 0.18
SNX6-202ENST00000396526 F11P03951 625 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 CYTH1Q15438 398 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 TRIM67Q6ZTA4 783 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 METTL3Q86U44 580 aaKnown RBP16.18■□□□□ 0.18
SNX6-202ENST00000396526 MFSD6LQ8IWD5 586 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 OR13C4Q8NGS5 318 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 DDI1Q8WTU0 396 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.18■□□□□ 0.183e-7■■■■■ 43.2
SNX6-202ENST00000396526 GPR78Q96P69 363 aa16.18■□□□□ 0.18
SNX6-202ENST00000396526 TDRD1Q9BXT4 1180 aaKnown RBP16.18■□□□□ 0.18
SNX6-202ENST00000396526 RNPEPL1Q9HAU8 725 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms