RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 A0A1W2PQ67 120 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 RNF40O75150 1001 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 LEFTY1O75610 366 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 INHBAP08476 426 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 TMED2Q15363 201 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 TAF1AQ15573 450 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 ARSIQ5FYB1 569 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 EGFLAMQ63HQ2 1017 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 PDPK2PQ6A1A2 396 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 RALGPS2Q86X27 583 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 KRT222Q8N1A0 295 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 MDGA1Q8NFP4 955 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 SLC44A1Q8WWI5 657 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 ECHDC3Q96DC8 303 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 KLHL32Q96NJ5 620 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 DHRS4Q9BTZ2 278 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 STMN4Q9H169 189 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 TMEM245Q9H330 911 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 C8orf33Q9H7E9 229 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 HEBP1Q9NRV9 189 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 ZFATQ9P243 1243 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 PHTF1Q9UMS5 762 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 STARD13Q9Y3M8 1113 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 KCTD3Q9Y597 815 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 A0A0J9YYE9 177 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 C2orf81A6NN90 581 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 HMGB1P1B2RPK0 211 aaPredicted RBP20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 VAPBO95292 243 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 TRBC1P01850 177 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 IL9P15248 144 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 IL12RB1P42701 662 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 TNFRSF4P43489 277 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 E2F5Q15329 346 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 KIAA0930Q6ICG6 404 aaPredicted RBP20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 TXNDC11Q6PKC3 985 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 ADGRD1Q6QNK2 874 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 SLC26A11Q86WA9 606 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 ZSWIM9Q86XI8 627 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 NDUFAF2Q8N183 169 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 DCAKDQ8WVC6 231 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 PEX13Q92968 403 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 LRIG1Q96JA1 1093 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 OSBPL1AQ9BXW6 950 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 MAGEE1Q9HCI5 957 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 EURLQ9NYK6 297 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 OGFRQ9NZT2 677 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 LGALS13Q9UHV8 139 aa20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 NOVA2Q9UNW9 492 aaKnown RBP20.5■□□□□ 0.87
VCPKMT-202ENST00000395860 AURKAO14965 403 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 BUD23O43709 281 aaKnown RBP20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 SLC4A1P02730 911 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 ALPIP09923 528 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 BMP1P13497 986 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 ATP5DP30049 168 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 NAB1Q13506 487 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 RASA2Q15283 850 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 HSP90AA5PQ58FG0 334 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 EMC10Q5UCC4 262 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 MARK2Q7KZI7 788 aaKnown RBP20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 OR13J1Q8NGT2 312 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 STYXQ8WUJ0 223 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 SRPK1Q96SB4 655 aaKnown RBP20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 ZDHHC4Q9NPG8 344 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 SUN2Q9UH99 717 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 HCN2Q9UL51 889 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 ANTXRLA6NF34 631 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 SIN3BO75182 1162 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 CTSLP07711 333 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 PDE1BQ01064 536 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 PFKPQ01813 784 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 TFF2Q03403 129 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 PON2Q15165 354 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 PTPRRQ15256 657 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 C9orf64Q5T6V5 341 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 STK40Q8N2I9 435 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 ZNF513Q8N8E2 541 aaPredicted RBP20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 OR8D1Q8WZ84 308 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 ACOX2Q99424 681 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 TRABDQ9H4I3 376 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 IARS2Q9NSE4 1012 aaKnown RBP20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 CACNA2D2Q9NY47 1150 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 RIMKLBQ9ULI2 386 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 ZNF711Q9Y462 761 aa20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 SPTBN5Q9NRC6 3674 aaKnown RBP20.49■□□□□ 0.87
VCPKMT-202ENST00000395860 GOLGA8TH3BQL2 631 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 K7EQS6 105 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 NARSO43776 548 aaKnown RBP20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 UGT1A9O60656 530 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 EPHX1P07099 455 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 HNRNPLP14866 589 aaKnown RBP eCLIP20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 LPOP22079 712 aaPredicted RBP20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 SEC13P55735 322 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 POLR2LP62875 67 aaKnown RBP20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 PRAMEP78395 509 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 TMPRSS15P98073 1019 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 THOC5Q13769 683 aaKnown RBP20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 BRAT1Q6PJG6 821 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 CYP4X1Q8N118 509 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 OR13C4Q8NGS5 318 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 DNAJC1Q96KC8 554 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms