RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 TSACCQ96A04 125 aaPredicted RBP16.26■□□□□ 0.19
CXCL12-206ENST00000395795 COQ10AQ96MF6 247 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.26■□□□□ 0.19
CXCL12-206ENST00000395795 C1QTNF7Q9BXJ2 289 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 PACSIN1Q9BY11 444 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 SEPT3Q9UH03 358 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 ANAPC7Q9UJX3 599 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 LOC400499M0QZD8 3231 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 PTPRQQ9UMZ3 2332 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 TMEM202A6NGA9 273 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 TRIM23P36406 574 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 PPARDQ03181 441 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 BCL2L1Q07817 233 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 TRAF2Q12933 501 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 MTM1Q13496 603 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 ERAP2Q6P179 960 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 EFL1Q7Z2Z2 1120 aaKnown RBP16.25■□□□□ 0.19
CXCL12-206ENST00000395795 TEX26Q8N6G2 289 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 OR1E3Q8WZA6 343 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 PDXPQ96GD0 296 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 BBC3Q96PG8 261 aaPredicted RBP16.25■□□□□ 0.19
CXCL12-206ENST00000395795 NUDCD1Q96RS6 583 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 LGR4Q9BXB1 951 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 XPO4Q9C0E2 1151 aaKnown RBP16.25■□□□□ 0.19
CXCL12-206ENST00000395795 NOD2Q9HC29 1040 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 B4GALT6Q9UBX8 382 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 IP6K2Q9UHH9 426 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 RABGEF1Q9UJ41 708 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 LUC7L2Q9Y383 392 aaKnown RBP16.25■□□□□ 0.19
CXCL12-206ENST00000395795 PCDHGC4Q9Y5F7 938 aa16.25■□□□□ 0.19
CXCL12-206ENST00000395795 PMS2P1A4D2B8 440 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 CSO75390 466 aaKnown RBP16.24■□□□□ 0.19
CXCL12-206ENST00000395795 FUCA1P04066 466 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 PCCBP05166 539 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 LHCGRP22888 699 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 XPAP23025 273 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-206ENST00000395795 ARL4AP40617 200 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 DUSP3P51452 185 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-206ENST00000395795 TAS2R40P59535 323 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 CNGA3Q16281 694 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 SOWAHCQ53LP3 525 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-206ENST00000395795 FAXCQ5TGI0 409 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 SFTPA2Q8IWL1 248 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 PCDH19Q8TAB3 1148 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 IQCDQ96DY2 449 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 PRR11Q96HE9 360 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-206ENST00000395795 SMIM14Q96QK8 99 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 FGF22Q9HCT0 170 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 DGKBQ9Y6T7 804 aa16.24■□□□□ 0.19
CXCL12-206ENST00000395795 NBEAQ8NFP9 2946 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 CPED1A4D0V7 1026 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 TMEM110-MUSTN1A8MSY1 372 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 A8MX80 341 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 MFSD11O43934 449 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 DXOO77932 396 aaKnown RBP16.23■□□□□ 0.19
CXCL12-206ENST00000395795 RENBPP51606 427 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 KIAA1024LP59773 190 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 SRP54P61011 504 aaKnown RBP16.23■□□□□ 0.19
CXCL12-206ENST00000395795 MAXP61244 160 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 DPYSL3Q14195 570 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 NR0B2Q15466 257 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 ISXQ2M1V0 245 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 TBC1D25Q3MII6 688 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 HS1BP3Q53T59 392 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 CCDC122Q5T0U0 273 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 NCBP2-AS2Q69YL0 99 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 CRTC1Q6UUV9 634 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 ENPP7Q6UWV6 458 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 HID1Q8IV36 788 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 PQLC3Q8N755 202 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 KYQ8NBH2 561 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 MAPK15Q8TD08 544 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 FAF2Q96CS3 445 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 HIC2Q96JB3 615 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 MCCC1Q96RQ3 725 aaPredicted RBP16.23■□□□□ 0.19
CXCL12-206ENST00000395795 RBM15Q96T37 977 aaKnown RBP eCLIP16.23■□□□□ 0.19
CXCL12-206ENST00000395795 DNAJC7Q99615 494 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 IL12RB2Q99665 862 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 SLC13A1Q9BZW2 595 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 ASCL3Q9NQ33 180 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 RCOR3Q9P2K3 495 aaPredicted RBP16.23■□□□□ 0.19
CXCL12-206ENST00000395795 PPIL1Q9Y3C6 166 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 ENTPD2Q9Y5L3 495 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 RAI2Q9Y5P3 530 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 AK5Q9Y6K8 562 aa16.23■□□□□ 0.19
CXCL12-206ENST00000395795 A0A0U1RQS6 177 aa16.22■□□□□ 0.19
CXCL12-206ENST00000395795 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-206ENST00000395795 NTN3O00634 580 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-206ENST00000395795 FZD6O60353 706 aa16.22■□□□□ 0.19
CXCL12-206ENST00000395795 SOCS5O75159 536 aa16.22■□□□□ 0.19
CXCL12-206ENST00000395795 PROSCO94903 275 aa16.22■□□□□ 0.19
CXCL12-206ENST00000395795 HEXIM1O94992 359 aaKnown RBP16.22■□□□□ 0.19
CXCL12-206ENST00000395795 MPOP05164 745 aa16.22■□□□□ 0.19
CXCL12-206ENST00000395795 HOXC4P09017 264 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-206ENST00000395795 HSPA9P38646 679 aaKnown RBP16.22■□□□□ 0.19
CXCL12-206ENST00000395795 CDH6P55285 790 aa16.22■□□□□ 0.19
CXCL12-206ENST00000395795 GALNT2Q10471 571 aa16.22■□□□□ 0.19
CXCL12-206ENST00000395795 PAFAH1B3Q15102 231 aaKnown RBP16.22■□□□□ 0.19
CXCL12-206ENST00000395795 TCEA2Q15560 299 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms