RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CYP2A6P11509 494 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-205ENST00000395794 MX2P20592 715 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 KELP23276 732 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 IL4RP24394 825 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 MAN1A1P33908 653 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 ADKP55263 362 aaKnown RBP13.81□□□□□ -0.2
CXCL12-205ENST00000395794 INSM1Q01101 510 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-205ENST00000395794 MTM1Q13496 603 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 CAMK2BQ13554 666 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 DPYSL3Q14195 570 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 MESDQ14696 234 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 NFATC4Q14934 902 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 ACOX1Q15067 660 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 ELOCQ15369 112 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 NR0B2Q15466 257 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 DEFB133Q30KQ1 61 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 ANKRD20A8PQ5CZ79 823 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 TPRG1LQ5T0D9 272 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 ENPP7Q6UWV6 458 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 DPPA4Q7L190 304 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 RD3Q7Z3Z2 195 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 HID1Q8IV36 788 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 CNGA4Q8IV77 575 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 RBFAQ8N0V3 343 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 CACTIN-AS1Q8N1I8 211 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 FAM71BQ8TC56 605 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 RFFLQ8WZ73 363 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 ZNF830Q96NB3 372 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-205ENST00000395794 MGME1Q9BQP7 344 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 APOOQ9BUR5 198 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 PACSIN1Q9BY11 444 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-205ENST00000395794 NOD2Q9HC29 1040 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 NT5MQ9NPB1 228 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 KCTD5Q9NXV2 234 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 PHTF1Q9UMS5 762 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 OR1A2Q9Y585 309 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 ASPMQ8IZT6 3477 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 TTC24A2A3L6 582 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 CPED1A4D0V7 1026 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 AKR1B15C9JRZ8 316 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 LMO7DNF2Z398 122 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 TAF4O00268 1085 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 PDE2AO00408 941 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 TRAFD1O14545 582 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 PEX11BO96011 259 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 MT-CO3P00414 261 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 ALPIP09923 528 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 CES1P23141 567 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 GARSP41250 739 aaKnown RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 ARHGAP25P42331 645 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 CLDN6P56747 220 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 MAXP61244 160 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 GALNT2Q10471 571 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 C1orf61Q13536 156 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 PAFAH1B3Q15102 231 aaKnown RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 CDKN3Q16667 212 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 ASTE1Q2TB18 679 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 ATP13A4Q4VNC1 1196 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 ARMC12Q5T9G4 340 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 ESRP1Q6NXG1 681 aaKnown RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 LIPIQ6XZB0 460 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 RHOT2Q8IXI1 618 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 PGBD5Q8N414 524 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 PCDH19Q8TAB3 1148 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 IFI44Q8TCB0 444 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 MAPK15Q8TD08 544 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 WDR92Q96MX6 357 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 MAK16Q9BXY0 300 aaKnown RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 NRSN2Q9GZP1 204 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 POLR1EQ9GZS1 481 aaKnown RBP13.8□□□□□ -0.2
CXCL12-205ENST00000395794 CAAP1Q9H8G2 361 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 B4GALT6Q9UBX8 382 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 KLQ9UEF7 1012 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 TTLL3Q9Y4R7 772 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 CACNA1BQ00975 2339 aa13.8□□□□□ -0.2
CXCL12-205ENST00000395794 YY2O15391 372 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 HTRA2O43464 458 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-205ENST00000395794 MFSD11O43934 449 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 OPA1O60313 960 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 GCATO75600 419 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TNFP01375 233 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 MYF5P13349 255 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TSHRP16473 764 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 CR2P20023 1033 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 CA4P22748 312 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 CCNCP24863 283 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 VIPR1P32241 457 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 ARSEP51690 589 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 HK3P52790 923 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TAS2R40P59535 323 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 SRP54P61011 504 aaKnown RBP13.79□□□□□ -0.2
CXCL12-205ENST00000395794 RALGDSQ12967 914 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 ARHGEF7Q14155 803 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 DENND2CQ68D51 928 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 NCBP2-AS2Q69YL0 99 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 LVRNQ6Q4G3 990 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 USP45Q70EL2 814 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms