RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 BTBD9Q96Q07 612 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 CORO1BQ9BR76 489 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 HCFC1R1Q9NWW0 138 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 UBP1Q9NZI7 540 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 UXTQ9UBK9 157 aaPredicted RBP20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 MTCL1Q9Y4B5 1905 aaKnown RBP20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 MYO18AQ92614 2054 aaKnown RBP20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 ANKRD33BA6NCL7 494 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 ACSL4O60488 711 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 MAFKO60675 156 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 CD68P34810 354 aaPredicted RBP20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 HTR7P34969 479 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 POLE2P56282 527 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 ZXDBP98169 803 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 MED21Q13503 144 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 KLHDC10Q6PID8 442 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 FRMD7Q6ZUT3 714 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 CLEC14AQ86T13 490 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 KBTBD6Q86V97 674 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 DCLK2Q8N568 766 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 ZNF419Q96HQ0 510 aaPredicted RBP20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 SPATA16Q9BXB7 569 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 LRRC40Q9H9A6 602 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 RPS6KL1Q9Y6S9 549 aa20.02■□□□□ 0.79
CSNK1D-203ENST00000392334 A0A1W2PRU2 124 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 F5H5T6 163 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 TSPAN3O60637 253 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 PDE5AO76074 875 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 ERVK-10P10266 1014 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 RHOQP17081 205 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 TBL3Q12788 808 aaKnown RBP20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 KLF10Q13118 480 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 SDCCAG8Q86SQ7 713 aaPredicted RBP20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 LZTR1Q8N653 840 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 HMCESQ96FZ2 354 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 PRO3102Q9H379 93 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 TRIOBPQ9H2D6 2365 aa20.01■□□□□ 0.79
CSNK1D-203ENST00000392334 IGLV3-10A0A075B6K4 115 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 G3V2L1 256 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 H3BNX3 289 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 AP1G1O43747 822 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 EPCAMP16422 314 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 HDCP19113 662 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 NCF2P19878 526 aaPredicted RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 GLDCP23378 1020 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 OR1E1P30953 314 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 SGSHP51688 502 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 RPS24P62847 133 aaKnown RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 DYNC1I2Q13409 638 aaKnown RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 CUL3Q13618 768 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 VWA5B1Q5TIE3 1220 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 OTOP3Q7RTS5 596 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 TMEM135Q86UB9 458 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 PHTF2Q8N3S3 785 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 ZSCAN18Q8TBC5 510 aaPredicted RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 SREK1Q8WXA9 508 aaKnown RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 TIFAQ96CG3 184 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 GORASP1Q9BQQ3 440 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 KLF16Q9BXK1 252 aaPredicted RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 ATXN3LQ9H3M9 355 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 COG4Q9H9E3 785 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 TMEM248Q9NWD8 314 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 CPSF2Q9P2I0 782 aaKnown RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 AGO1Q9UL18 857 aaKnown RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 ZFP37Q9Y6Q3 630 aaPredicted RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 SHROOM3Q8TF72 1996 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 DRGXA6NNA5 263 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 J3KR12 359 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 USP12O75317 370 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 NFKB1P19838 968 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 SLC11A2P49281 568 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 HK2P52789 917 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 SMAD3P84022 425 aaKnown RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 CNPY1Q3B7I2 92 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 CCDC149Q6ZUS6 474 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 CNTD1Q8N815 330 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 FCRL3Q96P31 734 aaPredicted RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 BRD8Q9H0E9 1235 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 MID2Q9UJV3 735 aa20■□□□□ 0.79
CSNK1D-203ENST00000392334 PRPF19Q9UMS4 504 aaKnown RBP20■□□□□ 0.79
CSNK1D-203ENST00000392334 SLC22A2O15244 555 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 ZBTB14O43829 449 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 CLASP2O75122 1294 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 HSPA4LO95757 839 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 PABPC4LP0CB38 370 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 VCLP18206 1134 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 CCNCP24863 283 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 PEX2P28328 305 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 PPP3CCP48454 512 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 OGFRL1Q5TC84 451 aaPredicted RBP19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 ZNF697Q5TEC3 545 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 AFMIDQ63HM1 303 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 LPCAT4Q643R3 524 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 HPS6Q86YV9 775 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 TMC8Q8IU68 726 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 ZNF781Q8N8C0 355 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 CNDP1Q96KN2 507 aa19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 ZFRQ96KR1 1074 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-203ENST00000392334 ZNF358Q9NW07 568 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms