RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SLC18A2Q05940 514 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RUNX1T1Q06455 604 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TBL3Q12788 808 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TBX2Q13207 712 aaPredicted RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 IFIT5Q13325 482 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ITGADQ13349 1161 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 PDCLQ13371 301 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ITGA9Q13797 1035 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ENPP2Q13822 863 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 GTF2H2Q13888 395 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 BYSLQ13895 437 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RUNX2Q13950 521 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 DCTN1Q14203 1278 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 NEDD9Q14511 834 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CTF1Q16619 201 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 NFE2Q16621 373 aaPredicted RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ME3Q16798 604 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SOWAHAQ2M3V2 549 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 GFOD2Q3B7J2 385 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SNAI3Q3KNW1 292 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 GALNTL6Q49A17 601 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 FBXO43Q4G163 708 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RUNDC3AQ59EK9 446 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 WDR38Q5JTN6 314 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SIRPB2Q5JXA9 342 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ODR4Q5SWX8 454 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ZDHHC20Q5W0Z9 365 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 FAM53AQ6NSI3 398 aaPredicted RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TRNP1Q6NT89 227 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RGMBQ6NW40 437 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF774Q6NX45 483 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 FAAP20Q6NZ36 180 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 GTF2H2CQ6P1K8 395 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 GGT6Q6P531 493 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 FAM171BQ6P995 826 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 METTL7BQ6UX53 244 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SLC36A4Q6YBV0 504 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RSRC2Q7L4I2 434 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RASGRP2Q7LDG7 609 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 C14orf80Q86SX3 495 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TRPT1Q86TN4 253 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CHD1LQ86WJ1 897 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 GATAD2AQ86YP4 633 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SFTPA2Q8IWL1 248 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 LMNTD2Q8IXW0 634 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 FAM186BQ8IYM0 893 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF34Q8IZ26 560 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RNF113BQ8IZP6 322 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SLC34A3Q8N130 599 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 PARP16Q8N5Y8 322 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SETD9Q8NE22 299 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 DDHD1Q8NEL9 900 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 DNAAF1Q8NEP3 725 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ZMIZ2Q8NF64 920 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TRIM58Q8NG06 486 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 OR2T6Q8NHC8 308 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CEP70Q8NHQ1 597 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CSGALNACT1Q8TDX6 532 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 GRHL3Q8TE85 626 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 DUSP19Q8WTR2 217 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 BRI3BPQ8WY22 251 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TMEM190Q8WZ59 177 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ABTB1Q969K4 478 aaPredicted RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TAAR8Q969N4 342 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 KLHL29Q96CT2 875 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 MOCOSQ96EN8 888 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 C18orf12Q96KH6 178 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF300Q96RE9 604 aaPredicted RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CMKLR1Q99788 373 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ASCL2Q99929 193 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RBM4BQ9BQ04 359 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TRIM51Q9BSJ1 452 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SYT11Q9BT88 431 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TP63Q9H3D4 680 aaPredicted RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TFB2MQ9H5Q4 396 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ELAC1Q9H777 363 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ERVMER34-1Q9H9K5 563 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 FKRPQ9H9S5 495 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 FGF22Q9HCT0 170 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CNGB3Q9NQW8 809 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SPATS2LQ9NUQ6 558 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 PRR34Q9NV39 138 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TMEM30AQ9NV96 361 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 THAP1Q9NVV9 213 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 HCFC1R1Q9NWW0 138 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 OBP2AQ9NY56 170 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CISD1Q9NZ45 108 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 C1RLQ9NZP8 487 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CHPF2Q9P2E5 772 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF624Q9P2J8 865 aaPredicted RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 CACNG5Q9UF02 275 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 FBXO40Q9UH90 709 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 KCND3Q9UK17 655 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 RCOR1Q9UKL0 485 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 SLC39A10Q9ULF5 831 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 TP53TG3Q9ULZ0 132 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 DAPP1Q9UN19 280 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 THRAP3Q9Y2W1 955 aaKnown RBP0.53□□□□□ -2.32
SNORD28-201ENST00000384706 DAAM1Q9Y4D1 1078 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 PCDHGB5Q9Y5G0 923 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms