RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 HOXC4P09017 264 aaPredicted RBP17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 GLB1P16278 677 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 KELP23276 732 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 SERPINA4P29622 427 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 SLC5A2P31639 672 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 COPB1P53618 953 aaKnown RBP17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 KIAA1614Q5VZ46 1190 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 DCUN1D2Q6PH85 259 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 XKR5Q6UX68 686 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 SRLQ86TD4 932 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 CAMK1DQ8IU85 385 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 ANKRD20A12PQ8NF67 263 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 OR56A4Q8NGH8 313 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 ECHDC3Q96DC8 303 aa17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 PCMTD1Q96MG8 357 aaPredicted RBP17.99■□□□□ 0.47
RPUSD3-201ENST00000383820 LGALS16A8MUM7 142 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 CACNB4O00305 520 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 NVLO15381 856 aaKnown RBP17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 CCDC172P0C7W6 258 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 POLR2LP62875 67 aaKnown RBP17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 NSUN2Q08J23 767 aaKnown RBP eCLIP17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 PPP1R2P3Q6NXS1 205 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 ZSWIM9Q86XI8 627 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 CCNJLQ8IV13 435 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 MCOLN2Q8IZK6 566 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 PDXPQ96GD0 296 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 ERGIC2Q96RQ1 377 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 FANCLQ9NW38 375 aa17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 LIMA1Q9UHB6 759 aaKnown RBP17.98■□□□□ 0.47
RPUSD3-201ENST00000383820 PALMO75781 387 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 RECQL5O94762 991 aaPredicted RBP17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 JMJD7P0C870 316 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 TRIM23P36406 574 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 PAPOLAP51003 745 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 ZFP36L1Q07352 338 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 RALGDSQ12967 914 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 RFTN1Q14699 578 aaPredicted RBP17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 CERCAMQ5T4B2 595 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 AFMIDQ63HM1 303 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 ACAD10Q6JQN1 1059 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 LIPIQ6XZB0 460 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 TAF8Q7Z7C8 310 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 JAMLQ86YT9 394 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 PLA2G15Q8NCC3 412 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 TSEN2Q8NCE0 465 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 OR1E3Q8WZA6 343 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 FUBP1Q96AE4 644 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 FOXP3Q9BZS1 431 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 SLC39A8Q9C0K1 460 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 AP4E1Q9UPM8 1137 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 ANKRD36A6QL64 1941 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 SCN8AQ9UQD0 1980 aa17.97■□□□□ 0.47
RPUSD3-201ENST00000383820 TMEM202A6NGA9 273 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 LRRC10BA6NIK2 292 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 EEF2KO00418 725 aaKnown RBP17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 EFSO43281 561 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 NOBOXO60393 691 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 ELFN1P0C7U0 828 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 LIPCP11150 499 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 FERP16591 822 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 RGRP47804 291 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 OGDHQ02218 1023 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 UBXN1Q04323 297 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 BCL2L1Q07817 233 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 TCEA2Q15560 299 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 TSR1Q2NL82 804 aaKnown RBP17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 C14orf28Q4W4Y0 310 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 NYAP1Q6ZVC0 841 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 DPPA4Q7L190 304 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 FAM46DQ8NEK8 389 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 SPOCK2Q92563 424 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 CELF6Q96J87 481 aaKnown RBP17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 CINPQ9BW66 212 aaPredicted RBP17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 FGF22Q9HCT0 170 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 LOXL2Q9Y4K0 774 aa17.96■□□□□ 0.47
RPUSD3-201ENST00000383820 TENM4Q6N022 2769 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 NUDT21O43809 227 aaKnown RBP17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 PRKCGP05129 697 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 RENBPP51606 427 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 ZNF135P52742 658 aaPredicted RBP17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 AP1S1P61966 158 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 IL10RBQ08334 325 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 HLTFQ14527 1009 aaKnown RBP eCLIP17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 ERMARDQ5T6L9 678 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 KCTD16Q68DU8 428 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 RBM43Q6ZSC3 357 aaKnown RBP17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 SPRED1Q7Z699 444 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 CMKLR1Q99788 373 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 B3GNT4Q9C0J1 378 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 DHX35Q9H5Z1 703 aaKnown RBP17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 SP110Q9HB58 689 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 PARVAQ9NVD7 372 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 GPATCH2LQ9NWQ4 482 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 KCTD5Q9NXV2 234 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 LRIT1Q9P2V4 623 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 UNC13CQ8NB66 2214 aa17.95■□□□□ 0.46
RPUSD3-201ENST00000383820 A0A1W2PQ67 120 aa17.94■□□□□ 0.46
RPUSD3-201ENST00000383820 TRAFD1O14545 582 aaPredicted RBP17.94■□□□□ 0.46
RPUSD3-201ENST00000383820 DAPK3O43293 454 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms