RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ELFN1P0C7U0 828 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 ERCC2P18074 760 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 KELP23276 732 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 RGRP47804 291 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 ZNF135P52742 658 aaPredicted RBP26.56■■□□□ 1.84
NPHP3-202ENST00000383282 SKOR1P84550 965 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 CFHR1Q03591 330 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 VAC14Q08AM6 782 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 NSUN2Q08J23 767 aaKnown RBP eCLIP26.56■■□□□ 1.84
NPHP3-202ENST00000383282 EIF3IQ13347 325 aaKnown RBP26.56■■□□□ 1.84
NPHP3-202ENST00000383282 NFKBIBQ15653 356 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 AOPEPQ8N6M6 819 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 WBP1Q96G27 269 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 LIN37Q96GY3 246 aaPredicted RBP26.56■■□□□ 1.84
NPHP3-202ENST00000383282 KCTD15Q96SI1 283 aaPredicted RBP26.56■■□□□ 1.84
NPHP3-202ENST00000383282 SYT11Q9BT88 431 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.56■■□□□ 1.84
NPHP3-202ENST00000383282 DGKBQ9Y6T7 804 aa26.56■■□□□ 1.84
NPHP3-202ENST00000383282 RECQL5O94762 991 aaPredicted RBP26.55■■□□□ 1.84
NPHP3-202ENST00000383282 ITGA2BP08514 1039 aa26.55■■□□□ 1.84
NPHP3-202ENST00000383282 ATP1A3P13637 1013 aa26.55■■□□□ 1.84
NPHP3-202ENST00000383282 RENBPP51606 427 aa26.55■■□□□ 1.84
NPHP3-202ENST00000383282 PDX1P52945 283 aa26.55■■□□□ 1.84
NPHP3-202ENST00000383282 PPP6R3Q5H9R7 873 aaPredicted RBP26.55■■□□□ 1.84
NPHP3-202ENST00000383282 FNIP1Q8TF40 1166 aa26.55■■□□□ 1.84
NPHP3-202ENST00000383282 RBM15Q96T37 977 aaKnown RBP eCLIP26.55■■□□□ 1.84
NPHP3-202ENST00000383282 STRADBQ9C0K7 418 aa26.55■■□□□ 1.84
NPHP3-202ENST00000383282 HSD3B7Q9H2F3 369 aa26.55■■□□□ 1.84
NPHP3-202ENST00000383282 RP1P56715 2156 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 KIAA1024LP59773 190 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 IL10RBQ08334 325 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 ASIC2Q16515 512 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 AFMIDQ63HM1 303 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 PCSK4Q6UW60 755 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 LIPIQ6XZB0 460 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 CLEC14AQ86T13 490 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 ZNF605Q86T29 641 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 PSTKQ8IV42 348 aaKnown RBP26.54■■□□□ 1.84
NPHP3-202ENST00000383282 ARHGAP12Q8IWW6 846 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 ZNF843Q8N446 348 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 PLA2G15Q8NCC3 412 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 OR56A4Q8NGH8 313 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 ECHDC3Q96DC8 303 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 PDXPQ96GD0 296 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 PEBP4Q96S96 227 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 NAT10Q9H0A0 1025 aaKnown RBP26.54■■□□□ 1.84
NPHP3-202ENST00000383282 EPB41L5Q9HCM4 733 aa26.54■■□□□ 1.84
NPHP3-202ENST00000383282 COL27A1Q8IZC6 1860 aaPredicted RBP26.53■■□□□ 1.84
NPHP3-202ENST00000383282 TMEM191CA6NGB0 347 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 LRRC53A6NM62 1247 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 D6RAR5 112 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 PLD2O14939 933 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 CASC3O15234 703 aaKnown RBP26.53■■□□□ 1.84
NPHP3-202ENST00000383282 RPLP0P05388 317 aaKnown RBP26.53■■□□□ 1.84
NPHP3-202ENST00000383282 MIPP30301 263 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 SCNN1BP51168 640 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 AP1S1P61966 158 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 CCL7P80098 99 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 RALGDSQ12967 914 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 TAF8Q7Z7C8 310 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 FBXO39Q8N4B4 442 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 LZTR1Q8N653 840 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 ARFGAP1Q8N6T3 406 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 SNRNP27Q8WVK2 155 aaKnown RBP26.53■■□□□ 1.84
NPHP3-202ENST00000383282 TMEM74Q96NL1 305 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 ZWILCHQ9H900 591 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 SEPT3Q9UH03 358 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 RABGEF1Q9UJ41 708 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 SCINQ9Y6U3 715 aa26.53■■□□□ 1.84
NPHP3-202ENST00000383282 PMS2P1A4D2B8 440 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 TEX33O43247 280 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 INHBCP55103 352 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 FILIP1LQ4L180 1135 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 DPPA4Q7L190 304 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 RAB11FIP2Q7L804 512 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 NPWQ8N729 165 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 FUBP1Q96AE4 644 aaKnown RBP26.52■■□□□ 1.84
NPHP3-202ENST00000383282 LRRN3Q9H3W5 708 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 HAUS4Q9H6D7 363 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 CNOT8Q9UFF9 292 aaKnown RBP26.52■■□□□ 1.84
NPHP3-202ENST00000383282 SSUH2Q9Y2M2 353 aa26.52■■□□□ 1.84
NPHP3-202ENST00000383282 TNFRSF10CO14798 259 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 FTLP02792 175 aaPredicted RBP26.51■■□□□ 1.83
NPHP3-202ENST00000383282 HOXC4P09017 264 aaPredicted RBP26.51■■□□□ 1.83
NPHP3-202ENST00000383282 GZMAP12544 262 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 HCAR3P49019 387 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 LBRQ14739 615 aaKnown RBP26.51■■□□□ 1.83
NPHP3-202ENST00000383282 TMCO4Q5TGY1 634 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 CCDC81Q6ZN84 652 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 ARHGAP36Q6ZRI8 547 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 FAM46DQ8NEK8 389 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 GPR156Q8NFN8 814 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 OR1E3Q8WZA6 343 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 ZNF653Q96CK0 615 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 ZNF599Q96NL3 588 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 PSKH2Q96QS6 385 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.51■■□□□ 1.83
NPHP3-202ENST00000383282 WDR26Q9H7D7 661 aa26.51■■□□□ 1.83
NPHP3-202ENST00000383282 RTN4Q9NQC3 1192 aaKnown RBP26.51■■□□□ 1.83
NPHP3-202ENST00000383282 MOSPD1Q9UJG1 213 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms