RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 AKAP12Q02952 1782 aa17.22■□□□□ 0.35
SGCB-201ENST00000381431 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 KCNU1A8MYU2 1149 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 TBL1XO60907 577 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 WFS1O76024 890 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 C22orf31O95567 290 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 FGF1P05230 155 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 SLC5A3P53794 718 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 GRIK3Q13003 919 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 MRPL28Q13084 256 aaKnown RBP17.21■□□□□ 0.35
SGCB-201ENST00000381431 HECTD2Q5U5R9 776 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 SDE2Q6IQ49 451 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 DOK6Q6PKX4 331 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 TAC4Q86UU9 113 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 OR8H2Q8N162 312 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 FAM47BQ8NA70 645 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 RTKNQ9BST9 563 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 KCNH1O95259 989 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 PTPN3P26045 913 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 GRK3P35626 688 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 MTMR14Q8NCE2 650 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 SLC12A4Q9UP95 1085 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 A0A0J9YYE9 177 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 RECQL5O94762 991 aaPredicted RBP17.21■□□□□ 0.35
SGCB-201ENST00000381431 LRATO95237 230 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 CATP04040 527 aaKnown RBP17.21■□□□□ 0.35
SGCB-201ENST00000381431 MC4RP32245 332 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 ADARP55265 1226 aaKnown RBP17.21■□□□□ 0.35
SGCB-201ENST00000381431 TAS2R39P59534 338 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 FAM187BQ17R55 369 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 SOWAHAQ2M3V2 549 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 AP5B1Q2VPB7 878 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 FAM151BQ6UXP7 276 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 C8orf59Q8N0T1 100 aaPredicted RBP17.21■□□□□ 0.35
SGCB-201ENST00000381431 PPM1MQ96MI6 270 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 GMIPQ9P107 970 aa17.21■□□□□ 0.35
SGCB-201ENST00000381431 MAP1BP46821 2468 aaKnown RBP17.21■□□□□ 0.35
SGCB-201ENST00000381431 CXorf49A8MYA2 514 aaPredicted RBP17.2■□□□□ 0.34
SGCB-201ENST00000381431 IFRD1O00458 451 aaPredicted RBP17.2■□□□□ 0.34
SGCB-201ENST00000381431 SMPD1P17405 629 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 TKTP29401 623 aaKnown RBP17.2■□□□□ 0.34
SGCB-201ENST00000381431 CHRNA4P43681 627 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 FLT3LGP49771 235 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 NR1H2P55055 460 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 MTA1Q13330 715 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 DCTN2Q13561 401 aaKnown RBP17.2■□□□□ 0.34
SGCB-201ENST00000381431 SLC5A9Q2M3M2 681 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 HNRNPABQ99729 332 aaKnown RBP17.2■□□□□ 0.34
SGCB-201ENST00000381431 ARHGEF3Q9NR81 526 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 PRKAR2AP13861 404 aaKnown RBP17.2■□□□□ 0.34
SGCB-201ENST00000381431 PSEN1P49768 467 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 C21orf59P57076 290 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 ACSBG2Q5FVE4 666 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 SYPL2Q5VXT5 272 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 RD3Q7Z3Z2 195 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 ARHGAP22Q7Z5H3 698 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 ADHFE1Q8IWW8 467 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 FSTL5Q8N475 847 aaPredicted RBP17.2■□□□□ 0.34
SGCB-201ENST00000381431 REEP1Q9H902 201 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 TPRKBQ9Y3C4 175 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 EPN2O95208 641 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 UQCRBP14927 111 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 AIF1P55008 147 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 MSS51Q4VC12 460 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 PLEKHM3Q6ZWE6 761 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 ELMO1Q92556 727 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 APOL4Q9BPW4 351 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 RNF208Q9H0X6 261 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 SYNDIG1Q9H7V2 258 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 DAPK2Q9UIK4 370 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 PPEF2O14830 753 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 GRK4P32298 578 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 ACBD5Q5T8D3 534 aaPredicted RBP17.2■□□□□ 0.34
SGCB-201ENST00000381431 ADAMTSL2Q86TH1 951 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 NACC2Q96BF6 587 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 CAMKK2Q96RR4 588 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 GBA3Q9H227 469 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 RBPJLQ9UBG7 517 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 U3KQV3 271 aa17.2■□□□□ 0.34
SGCB-201ENST00000381431 DPPA5A6NC42 116 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 DAOAP59103 153 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 LSM12Q3MHD2 195 aaKnown RBP17.19■□□□□ 0.34
SGCB-201ENST00000381431 TTC23Q5W5X9 447 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 USP45Q70EL2 814 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 SETD9Q8NE22 299 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 CLHC1Q8NHS4 586 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 C10orf82Q8WW14 230 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 LPGAT1Q92604 370 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 SLCO2A1Q92959 643 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 ADPRHL2Q9NX46 363 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 NEMP2A6NFY4 417 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 H0YGN5 161 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 SOX6P35712 828 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 POLR2LP62875 67 aaKnown RBP17.19■□□□□ 0.34
SGCB-201ENST00000381431 ILF2Q12905 390 aaKnown RBP17.19■□□□□ 0.34
SGCB-201ENST00000381431 ESAMQ96AP7 390 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 TEKT5Q96M29 485 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 TRMOQ9BU70 441 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms