RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ZNF668Q96K58 619 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 RPRD1AQ96P16 312 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 FUNDC2Q9BWH2 189 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 PRRG3Q9BZD7 231 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ANKRD6Q9Y2G4 727 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 PRELID3BQ9Y3B1 194 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 GMPPBQ9Y5P6 360 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 A0A0B4J269 797 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 SAC3D1A6NKF1 404 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 SYNCRIPO60506 623 aaKnown RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 PLA2G4BP0C869 781 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 MBL2P11226 248 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 POU3F3P20264 500 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ME2P23368 584 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 F8A1P23610 371 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 PLA2G16P53816 162 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 DSC1Q08554 894 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 LRRC74AQ0VAA2 488 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 FAAP100Q0VG06 881 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 TMEM236Q5W0B7 351 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 TMEM81Q6P7N7 255 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 C16orf89Q6UX73 402 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 LINC00299Q6ZSB3 139 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 RIOX2Q8IUF8 465 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 SLC9A9Q8IVB4 645 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 P3H2Q8IVL5 708 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 PALM2Q8IXS6 379 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 PHTF2Q8N3S3 785 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 RHOXF1Q8NHV9 184 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 RIT1Q92963 219 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 NSUN4Q96CB9 384 aaKnown RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ZHX1-C8orf76Q96EF9 292 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 RNF170Q96K19 258 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 FOPNLQ96NB1 174 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 RTKNQ9BST9 563 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 GPR88Q9GZN0 384 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 REXO4Q9GZR2 422 aaKnown RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 B3GNT2Q9NY97 397 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 COPS3Q9UNS2 423 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 NRCAMQ92823 1304 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 KAT6AQ92794 2004 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 PIK3R2O00459 728 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 SOCS2O14508 198 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 AP3D1O14617 1153 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 SYN3O14994 580 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ABCB7O75027 752 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 RAD17O75943 681 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 GCNT3O95395 438 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 APOC1P02654 83 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 MAOBP27338 520 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 NUBP1P53384 320 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF181Q2M3W8 571 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 FUT11Q495W5 492 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 BROXQ5VW32 411 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ADGRD1Q6QNK2 874 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ZCCHC23Q6ZST2 131 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 C16orf62Q7Z3J2 963 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 POLNQ7Z5Q5 900 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 OR7A2PQ8NGA2 310 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 DEDD2Q8WXF8 326 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 FOXJ1Q92949 421 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 FBXL20Q96IG2 436 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 TMEM47Q9BQJ4 181 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 DGCR6LQ9BY27 220 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 TRIM45Q9H8W5 580 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 LRRC40Q9H9A6 602 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 IFT80Q9P2H3 777 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-204ENST00000380393 STOML2Q9UJZ1 356 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 HRH3Q9Y5N1 445 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ACTL7AQ9Y615 435 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 CIB4A0PJX0 185 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 AKAP3O75969 853 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 GLAP06280 429 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 HOXD4P09016 255 aaPredicted RBP9.4□□□□□ -0.9
PTPRA-204ENST00000380393 CYP2C8P10632 490 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 SFTPCP11686 197 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 SSTR1P30872 391 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 HLCSP50747 726 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 ERVFC1P60507 584 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 PLIN5Q00G26 463 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 TUBB3Q13509 450 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 STXBP4Q6ZWJ1 553 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 PAGE2Q7Z2X7 111 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 TFAP2DQ7Z6R9 452 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 STX12Q86Y82 276 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 UBQLNLQ8IYU4 475 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 MCUQ8NE86 351 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 OR4M2Q8NGB6 313 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 PPP1R13LQ8WUF5 828 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 NXNL1Q96CM4 212 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 DNAJC19Q96DA6 116 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 GDF15Q99988 308 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 TMEM245Q9H330 911 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 BCAS3Q9H6U6 928 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 EFCAB1Q9HAE3 211 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 M0R2N6 131 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 XYLBO75191 536 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms