RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 HEY1Q9Y5J3 304 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 HS3ST4Q9Y661 456 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 G3V2L1 256 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 NRG2O14511 850 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ACSL4O60488 711 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 PAGE1O75459 146 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 CRABP2P29373 138 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 FDFT1P37268 417 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 EFEMP1Q12805 493 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 PIK3R6Q5UE93 754 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 LRRC49Q8IUZ0 686 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 TRIM42Q8IWZ5 723 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ULK2Q8IYT8 1036 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 LZTR1Q8N653 840 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 UCMAQ8WVF2 138 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ITPKCQ96DU7 683 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ATXN3LQ9H3M9 355 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 NEUROD4Q9HD90 331 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 PCMTD2Q9NV79 361 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 TMEM248Q9NWD8 314 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 HCFC1R1Q9NWW0 138 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 MUC22E2RYF6 1773 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 PRR5-ARHGAP8B1AHC4 643 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 TPP1O14773 563 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 LINC01565O15544 149 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 PGAM1P18669 254 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 MAPKAPK2P49137 400 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 SLC11A2P49281 568 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 EPHA4P54764 986 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ARHGAP8P85298 464 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 NME3Q13232 169 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 TEAD2Q15562 447 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 LCE2DQ5TA82 110 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 NADSYN1Q6IA69 706 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 IRGCQ6NXR0 463 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 RFX8Q6ZV50 586 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 GRASPQ7Z6J2 395 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 TMEM135Q86UB9 458 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 FAM131BQ86XD5 332 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 TP53INP2Q8IXH6 220 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 CELF5Q8N6W0 485 aaKnown RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF557Q8N988 423 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 DNAJC9Q8WXX5 260 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 C1QTNF1Q9BXJ1 281 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 PIF1Q9H611 641 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 SCHIP1Q9P0W5 487 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 SLC12A8A0AV02 714 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 NCAM2O15394 837 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 GYG2O15488 501 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 KRT38O76015 456 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 IL2RAP01589 272 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 RHOQP17081 205 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 CEBPBP17676 345 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 HDCP19113 662 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 FCARP24071 287 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 AQP5P55064 265 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 SMAD4Q13485 552 aaKnown RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 UBAP2LQ14157 1087 aaKnown RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ADGRF1Q5T601 910 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 GPR158Q5T848 1215 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ATG16L1Q676U5 607 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 RBM23Q86U06 439 aaKnown RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ARID3BQ8IVW6 561 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 NPAS3Q8IXF0 933 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF567Q8N184 647 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ELSPBP1Q96BH3 223 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF419Q96HQ0 510 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 LGMNQ99538 433 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 OSBPL1AQ9BXW6 950 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 WWP1Q9H0M0 922 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 SYBUQ9NX95 663 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 TBC1D14Q9P2M4 693 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 CDH7Q9ULB5 785 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 LRCH1Q9Y2L9 728 aa7.79□□□□□ -1.16
CDKL5-202ENST00000379996 MYO18AQ92614 2054 aaKnown RBP7.79□□□□□ -1.16
CDKL5-202ENST00000379996 ANHXE9PGG2 379 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 LEFTY2O00292 366 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 NVLO15381 856 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 MSI1O43347 362 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 OPHN1O60890 802 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 ECI2O75521 394 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 LYPLA1O75608 230 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 ITGA2BP08514 1039 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 MBL2P11226 248 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 MYL4P12829 197 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CD1EP15812 388 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 SP100P23497 879 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 MZF1P28698 734 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CD68P34810 354 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 IDH3AP50213 366 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CCNHP51946 323 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 NDST2P52849 883 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 ZXDBP98169 803 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CYP4F8P98187 520 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 PDE1BQ01064 536 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CCNIQ14094 377 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 FASTKD1Q53R41 847 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TXNDC8Q6A555 127 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms