RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 HDAC10Q969S8 669 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 ATP6V1E2Q96A05 226 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 CCDC126Q96EE4 140 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 BCAP29Q9UHQ4 241 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 AK5Q9Y6K8 562 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 ATP6AP2A0A1C7CYW4 349 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 PSMD12O00232 456 aaPredicted RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 UBDO15205 165 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 ATP6AP2O75787 350 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 CELF2O95319 508 aaKnown RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 PAPSS2O95340 614 aaPredicted RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 MT-CO1P00395 513 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 RBP1P09455 135 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 ZNF26P17031 533 aaPredicted RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 THPOP40225 353 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 RGS2P41220 211 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 GPR15P49685 360 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 RAB27AP51159 221 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 GALNT1Q10472 559 aaPredicted RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 C6orf52Q5T4I8 152 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 REP15Q6BDI9 236 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 LARP4Q71RC2 724 aaKnown RBP eCLIP10.98□□□□□ -0.65
BEST1-201ENST00000378043 SCN4BQ8IWT1 228 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 THEM5Q8N1Q8 247 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 GALNT4Q8N4A0 578 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 CALML6Q8TD86 181 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 NAT14Q8WUY8 206 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 PSMG2Q969U7 264 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 PTERQ96BW5 349 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 C3orf30Q96M34 536 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 PRICKLE1Q96MT3 831 aaPredicted RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 ADAM2Q99965 735 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 UNC93B1Q9H1C4 597 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 ALG9Q9H6U8 611 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 FBRSL1Q9HCM7 1045 aaKnown RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 POLR3BQ9NW08 1133 aaPredicted RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 SUCOQ9UBS9 1254 aaKnown RBP10.98□□□□□ -0.65
BEST1-201ENST00000378043 TLR6Q9Y2C9 796 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 TRAF6Q9Y4K3 522 aa10.98□□□□□ -0.65
BEST1-201ENST00000378043 MYOCOSA0A1B0GUC4 107 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 SLC7A4O43246 635 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 LDB2O43679 373 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 C8BP07358 591 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 IMPDH1P20839 514 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 CTGFP29279 349 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 USP46P62068 366 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 TIAL1Q01085 375 aaKnown RBP eCLIP10.97□□□□□ -0.65
BEST1-201ENST00000378043 YWHAHQ04917 246 aaPredicted RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 CACNB2Q08289 660 aaPredicted RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 ITKQ08881 620 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 RALGDSQ12967 914 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 SQLEQ14534 574 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 UGT3A2Q3SY77 523 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 SLC39A12Q504Y0 691 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 MS4A13Q5J8X5 152 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 SIRPB2Q5JXA9 342 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 MARC1Q5VT66 337 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 C8orf82Q6P1X6 216 aaPredicted RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 C17orf99Q6UX52 265 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 GALNT7Q86SF2 657 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 METTL25Q8N6Q8 603 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 C2orf69Q8N8R5 385 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 ARRDC2Q8TBH0 407 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 SLCO4A1Q96BD0 722 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 TADA1Q96BN2 335 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 PABPC5Q96DU9 382 aaKnown RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 FAR2Q96K12 515 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 CNBD2Q96M20 576 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 SERPINB11Q96P15 392 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 EPB41L1Q9H4G0 881 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 EML4Q9HC35 981 aaKnown RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 VPS45Q9NRW7 570 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 CD300AQ9UGN4 299 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 LZTS1Q9Y250 596 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 ATXN1LP0C7T5 689 aaKnown RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 NDST2P52849 883 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 STX5Q13190 355 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 LPIN1Q14693 890 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 PTPRCAPQ14761 206 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 TAF1CQ15572 869 aaPredicted RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 DDR2Q16832 855 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 MGAT5BQ3V5L5 792 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 ZNF678Q5SXM1 525 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 KLC3Q6P597 504 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 ZNF549Q6P9A3 640 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 FUNDC1Q8IVP5 155 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 TEX26Q8N6G2 289 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 CATSPER1Q8NEC5 780 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 OR6P1Q8NGX9 317 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 FATE1Q969F0 183 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 IGSF8Q969P0 613 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 ABI2Q9NYB9 513 aaPredicted RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 FNIP2Q9P278 1114 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 UXTQ9UBK9 157 aaPredicted RBP10.97□□□□□ -0.65
BEST1-201ENST00000378043 CRYL1Q9Y2S2 319 aa10.97□□□□□ -0.65
BEST1-201ENST00000378043 C7orf72A4D263 438 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 PPP6CO00743 305 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 TBX18O95935 607 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms