RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZBTB6Q15916 424 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 GALNT4Q8N4A0 578 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 ING5Q8WYH8 240 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 NXNL1Q96CM4 212 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 MED8Q96G25 268 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 COPS8Q99627 209 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 TNKS2Q9H2K2 1166 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 J3KR12 359 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 ITGB1P05556 798 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 PTPN2P17706 415 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 BANPQ8N9N5 519 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 RPL10LQ96L21 214 aaKnown RBP14.57□□□□□ -0.08
TCOF1-202ENST00000377797 TRIM4Q9C037 500 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 SLC17A6Q9P2U8 582 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 DOLKQ9UPQ8 538 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 INSL6Q9Y581 213 aa14.57□□□□□ -0.08
TCOF1-202ENST00000377797 TNPO3Q9Y5L0 923 aaKnown RBP14.57□□□□□ -0.08
TCOF1-202ENST00000377797 ZNF831Q5JPB2 1677 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 GRM6O15303 877 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 FGF19O95750 216 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 GJA1P17302 382 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 SGCGQ13326 291 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 MED21Q13503 144 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 TRMT5Q32P41 509 aaKnown RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 IGSF21Q96ID5 467 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 PARVBQ9HBI1 364 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 SSU72Q9NP77 194 aaKnown RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 ASB3Q9Y575 518 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 CXorf49A8MYA2 514 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 ZNF487B1APH4 448 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 PRMT5O14744 637 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 PLIN3O60664 434 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 VAV1P15498 845 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 EPHA3P29320 983 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 WDR4P57081 412 aaKnown RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 SULT2A1Q06520 285 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 OLIG2Q13516 323 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 SPDYE7PQ495Y7 208 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 ZDHHC14Q8IZN3 488 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 USP29Q9HBJ7 922 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 ANLNQ9NQW6 1124 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 NMRK1Q9NWW6 199 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 NENFQ9UMX5 172 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 DYRK1BQ9Y463 629 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 TMEM114B3SHH9 223 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 H0YGN5 161 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 IGFBP4P22692 258 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 ACVRL1P37023 503 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 WASHC5Q12768 1159 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 SFSWAPQ12872 951 aaKnown RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 DLG2Q15700 870 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 TMEM216Q9P0N5 145 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 NFS1Q9Y697 457 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 MGEA5O60502 916 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 PKMP14618 531 aaKnown RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 VCLP18206 1134 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 IFNA8P32881 189 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 VHLP40337 213 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 ATP6V0D1P61421 351 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 PREPLQ4J6C6 727 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 MS4A13Q5J8X5 152 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 DOK6Q6PKX4 331 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 ELAC1Q9H777 363 aaKnown RBP14.56□□□□□ -0.08
TCOF1-202ENST00000377797 ACSS2Q9NR19 701 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 SORCS3Q9UPU3 1222 aa14.56□□□□□ -0.08
TCOF1-202ENST00000377797 PHIPQ8WWQ0 1821 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ATP6AP2A0A1C7CYW4 349 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 PDZK1P1A8MUH7 402 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ATP6AP2O75787 350 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 CNTN5O94779 1100 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 COL6A2P12110 1019 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ZBTB17Q13105 803 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.55□□□□□ -0.08
TCOF1-202ENST00000377797 HOMEZQ8IX15 550 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 RBFAQ8N0V3 343 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 TRPV1Q8NER1 839 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 CSGALNACT1Q8TDX6 532 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 LINGO1Q96FE5 620 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 PPP1R16AQ96I34 528 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 NMUR1Q9HB89 426 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 CDK5RAP2Q96SN8 1893 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 IFRD1O00458 451 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-202ENST00000377797 FPGSQ05932 587 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ELMO1Q92556 727 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 INPP5DQ92835 1189 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.55□□□□□ -0.084e-6■□□□□ 11.1
TCOF1-202ENST00000377797 DEC1Q9P2X7 70 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 TTC24A2A3L6 582 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-202ENST00000377797 PDE5AO76074 875 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 FKBP9O95302 570 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ADH1CP00326 375 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 CATP04040 527 aaKnown RBP14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ANXA5P08758 320 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 CSF2RAP15509 400 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 TAS2R39P59534 338 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 KCNJ2P63252 427 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 PDE1CQ14123 709 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-202ENST00000377797 FKBP9P1Q75LS8 142 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 C14orf80Q86SX3 495 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ALYREFQ86V81 257 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms