RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 CNTN5O94779 1100 aa18.2■□□□□ 0.5
SF1-203ENST00000377387 HMBSP08397 361 aa18.2■□□□□ 0.5
SF1-203ENST00000377387 ZNF26P17031 533 aaPredicted RBP18.2■□□□□ 0.5
SF1-203ENST00000377387 SERPINH1P50454 418 aaKnown RBP18.2■□□□□ 0.5
SF1-203ENST00000377387 PHF12Q96QT6 1004 aa18.2■□□□□ 0.5
SF1-203ENST00000377387 UNC93B1Q9H1C4 597 aa18.2■□□□□ 0.5
SF1-203ENST00000377387 ABI2Q9NYB9 513 aaPredicted RBP18.2■□□□□ 0.5
SF1-203ENST00000377387 EGFL7Q9UHF1 273 aa18.2■□□□□ 0.5
SF1-203ENST00000377387 GRIA3P42263 894 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 PFKPQ01813 784 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 FAM110CQ1W6H9 321 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 SCD5Q86SK9 330 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 CIR1Q86X95 450 aaPredicted RBP18.19■□□□□ 0.5
SF1-203ENST00000377387 AFAP1L2Q8N4X5 818 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 HMCESQ96FZ2 354 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 OSER1Q9NX31 292 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 AURKCQ9UQB9 309 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 CROCCQ5TZA2 2017 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 hCG_2014768A0A024R1R8 64 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 ARHGEF37A1IGU5 675 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 GPR15P49685 360 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 RPS6KA3P51812 740 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 SQLEQ14534 574 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 RFTN1Q14699 578 aaPredicted RBP18.19■□□□□ 0.5
SF1-203ENST00000377387 MAP7D1Q3KQU3 841 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 GNASQ5JWF2 1037 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 LCA5Q86VQ0 697 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 SPATA2LQ8IUW3 424 aaPredicted RBP18.19■□□□□ 0.5
SF1-203ENST00000377387 OR13J1Q8NGT2 312 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 IRGQQ8WZA9 623 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.56e-15■■■■□ 22.3
SF1-203ENST00000377387 SLCO4A1Q96BD0 722 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 ACBD6Q9BR61 282 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 TMEM79Q9BSE2 394 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 SPAG4Q9NPE6 437 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 ABCC13Q9NSE7 274 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 CROTQ9UKG9 612 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 NR5A2O00482 541 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 AKAP10O43572 662 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 NRP2O60462 931 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 CHRNA1P02708 482 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 UGT1A6P19224 532 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 CD52P31358 61 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 ZNF135P52742 658 aaPredicted RBP18.19■□□□□ 0.5
SF1-203ENST00000377387 DNAJB13P59910 316 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 DDR2Q16832 855 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 FAM171BQ6P995 826 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 TTC16Q8NEE8 873 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 PSMG2Q969U7 264 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 TMIGD2Q96BF3 282 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 TBATAQ96M53 351 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 PARK7Q99497 189 aaKnown RBP18.19■□□□□ 0.5
SF1-203ENST00000377387 GSTO2Q9H4Y5 243 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 NOL6Q9H6R4 1146 aaKnown RBP18.19■□□□□ 0.5
SF1-203ENST00000377387 MEAF6Q9HAF1 191 aa18.19■□□□□ 0.5
SF1-203ENST00000377387 FAM149AA5PLN7 773 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 TBX18O95935 607 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 PURAQ00577 322 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 MAP2K5Q13163 448 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 GPR162Q16538 588 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 ALFQ53S48 1182 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 DDIASQ8IXT1 998 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 TRIML2Q8N7C3 387 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 RTL3Q8N8U3 475 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 RPL10LQ96L21 214 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 KCNA7Q96RP8 456 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 MRPS26Q9BYN8 205 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 RNF11Q9Y3C5 154 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 SAC3D1A6NKF1 404 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 PLOD2O00469 737 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 FGF10O15520 208 aaPredicted RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 MGEA5O60502 916 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 PRSS56P0CW18 603 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 HSPA1AP0DMV8 641 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 HSPA1BP0DMV9 641 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 PCSK6P29122 969 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 RGS2P41220 211 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 RPL26P61254 145 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 YBX1P67809 324 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 CAPRIN1Q14444 709 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 VPS26BQ4G0F5 336 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 PIK3R6Q5UE93 754 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 GDF6Q6KF10 455 aaPredicted RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 TIGD7Q6NT04 549 aaPredicted RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 KDELC1Q6UW63 502 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 ANKRD23Q86SG2 305 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 CILP2Q8IUL8 1156 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 AHI1Q8N157 1196 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 LZTR1Q8N653 840 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 CANT1Q8WVQ1 401 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 PTERQ96BW5 349 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 NSUN5Q96P11 429 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 LIN28AQ9H9Z2 209 aaKnown RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 TBC1D13Q9NVG8 400 aa18.18■□□□□ 0.5
SF1-203ENST00000377387 UXTQ9UBK9 157 aaPredicted RBP18.18■□□□□ 0.5
SF1-203ENST00000377387 SRP72O76094 671 aaKnown RBP18.17■□□□□ 0.5
SF1-203ENST00000377387 IGLV3-25P01717 112 aa18.17■□□□□ 0.5
SF1-203ENST00000377387 RBP1P09455 135 aa18.17■□□□□ 0.5
SF1-203ENST00000377387 CHRM3P20309 590 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms