RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 KLQ9UEF7 1012 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 SEPT3Q9UH03 358 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 CFAP69A5D8W1 941 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 H3BRJ5 948 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 TCEA3O75764 348 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 PTMSP20962 102 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 PCK1P35558 622 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 ARL4AP40617 200 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 SCNN1BP51168 640 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 RENBPP51606 427 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 UBASH3AP57075 661 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 ERVPABLB-1P60509 514 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 SRP54P61011 504 aaKnown RBP21.16■□□□□ 0.98
VSX1-201ENST00000376707 AP1S1P61966 158 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 DPYSQ14117 519 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 LBRQ14739 615 aaKnown RBP21.16■□□□□ 0.98
VSX1-201ENST00000376707 C3orf38Q5JPI3 329 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 TMCO4Q5TGY1 634 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 LVRNQ6Q4G3 990 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 ARL10Q8N8L6 244 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 PCDH19Q8TAB3 1148 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 ECHDC3Q96DC8 303 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 ATXN7L3BQ96GX2 97 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 WDR92Q96MX6 357 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 CCDC3Q9BQI4 270 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 SYNDIG1Q9H7V2 258 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 THSD1Q9NS62 852 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 SIRPGQ9P1W8 387 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 SATB2Q9UPW6 733 aa21.16■□□□□ 0.98
VSX1-201ENST00000376707 RECQL5O94762 991 aaPredicted RBP21.15■□□□□ 0.98
VSX1-201ENST00000376707 ELFN1P0C7U0 828 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 TDRD12Q587J7 1177 aaKnown RBP21.15■□□□□ 0.98
VSX1-201ENST00000376707 GKN2Q86XP6 184 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 SDR16C5Q8N3Y7 309 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 HIC2Q96JB3 615 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 PSKH2Q96QS6 385 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 CAPN11Q9UMQ6 739 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 GPR34Q9UPC5 381 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 ENTPD2Q9Y5L3 495 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 LOC400499M0QZD8 3231 aa21.15■□□□□ 0.98
VSX1-201ENST00000376707 CACNB4O00305 520 aaPredicted RBP21.14■□□□□ 0.97
VSX1-201ENST00000376707 TNFP01375 233 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 IL1R2P27930 398 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 RBMS1P29558 406 aaKnown RBP21.14■□□□□ 0.97
VSX1-201ENST00000376707 ZBED6P86452 979 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 RALGDSQ12967 914 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 SPIDRQ14159 915 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 ZNF235Q14590 738 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 DPYSL2Q16555 572 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 SMTNL2Q2TAL5 461 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 BOLA3Q53S33 107 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 BROXQ5VW32 411 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 TMCO3Q6UWJ1 677 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 LIPIQ6XZB0 460 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 DPPA4Q7L190 304 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 TP53INP2Q8IXH6 220 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 KYQ8NBH2 561 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 PLA2G15Q8NCC3 412 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 HSPH1Q92598 858 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 ZNF599Q96NL3 588 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.14■□□□□ 0.97
VSX1-201ENST00000376707 ASCL3Q9NQ33 180 aa21.14■□□□□ 0.97
VSX1-201ENST00000376707 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.14■□□□□ 0.97
VSX1-201ENST00000376707 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.13■□□□□ 0.97
VSX1-201ENST00000376707 GOLGA6L19H0YKK7 550 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 TRAFD1O14545 582 aaPredicted RBP21.13■□□□□ 0.97
VSX1-201ENST00000376707 SERPING1P05155 500 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 CXADRP78310 365 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 SLC10A7Q0GE19 358 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 ZSCAN23Q3MJ62 389 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 NYAP1Q6ZVC0 841 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 GPR155Q7Z3F1 870 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 KCNE4Q8WWG9 221 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 PDXPQ96GD0 296 aa21.13■□□□□ 0.97
VSX1-201ENST00000376707 A8MX80 341 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 AMPD1P23109 780 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 KELP23276 732 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 KIAA1024LP59773 190 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 PIGHQ14442 188 aaPredicted RBP21.12■□□□□ 0.97
VSX1-201ENST00000376707 ACOX1Q15067 660 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 FOXR1Q6PIV2 292 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 IGF2-ASQ6U949 168 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 POLNQ7Z5Q5 900 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 BBS5Q8N3I7 341 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 OR56A4Q8NGH8 313 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 FUBP1Q96AE4 644 aaKnown RBP21.12■□□□□ 0.97
VSX1-201ENST00000376707 CCDC74AQ96AQ1 378 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 RBM15Q96T37 977 aaKnown RBP eCLIP21.12■□□□□ 0.97
VSX1-201ENST00000376707 PCDHGA8Q9Y5G5 932 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 DGKBQ9Y6T7 804 aa21.12■□□□□ 0.97
VSX1-201ENST00000376707 BAHCC1Q9P281 2608 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 A0A1W2PNU3 283 aaPredicted RBP21.11■□□□□ 0.97
VSX1-201ENST00000376707 A0A1W2PQ67 120 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 TTC24A2A3L6 582 aaPredicted RBP21.11■□□□□ 0.97
VSX1-201ENST00000376707 TMEM202A6NGA9 273 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 CASC3O15234 703 aaKnown RBP21.11■□□□□ 0.97
VSX1-201ENST00000376707 TCF4P15884 667 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 HSPA9P38646 679 aaKnown RBP21.11■□□□□ 0.97
VSX1-201ENST00000376707 UCNP55089 124 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 KCTD16Q68DU8 428 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms