RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 LRIG2O94898 1065 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 CLIC3O95833 236 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 LRPAP1P30533 357 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 CHRNA4P43681 627 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 YBX1P67809 324 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 BTBD8Q5XKL5 378 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF296Q8WUU4 475 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 STON2Q8WXE9 905 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 PBXIP1Q96AQ6 731 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 UHRF1Q96T88 793 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 MEAF6Q9HAF1 191 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 SMOXQ9NWM0 555 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 SLC8A2Q9UPR5 921 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 TRIP12Q14669 1992 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 A8MT66 165 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 DLGAP1O14490 977 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 UBFD1O14562 309 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 TFPTP0C1Z6 253 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 IMPDH2P12268 514 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 TAF6P49848 677 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 UGP2Q16851 508 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 NOMO2Q5JPE7 1267 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 DENND5AQ6IQ26 1287 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 PPP4R4Q6NUP7 873 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 RETREG3Q86VR2 466 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 MIPOL1Q8TD10 442 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 DNAJB3Q8WWF6 145 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 TOP1MTQ969P6 601 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 ISOC1Q96CN7 298 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 OLFM1Q99784 485 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 TBL1YQ9BQ87 522 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 TRIM8Q9BZR9 551 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 TKTL2Q9H0I9 626 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 MRPL40Q9NQ50 206 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 TMEM30AQ9NV96 361 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 GDAP2Q9NXN4 497 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 GIMAP2Q9UG22 337 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 EGFL7Q9UHF1 273 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 SQORQ9Y6N5 450 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 HAS3O00219 553 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 SEPT4O43236 478 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 MTSS1O43312 755 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 SRP72O76094 671 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 SLC12A2P55011 1212 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 LILRA4P59901 499 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 IRF5Q13568 498 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 SEPT6Q14141 434 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 SAMD4BQ5PRF9 694 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 ACBD5Q5T8D3 534 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 WSCD1Q658N2 575 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 ELMSAN1Q6PJG2 1045 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 CYHR1Q6ZMK1 362 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 GPR141Q7Z602 305 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 SPPL2CQ8IUH8 684 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 FUNDC1Q8IVP5 155 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 DPF3Q92784 378 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 NTAN1Q96AB6 310 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 C12orf43Q96C57 262 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 C3orf30Q96M34 536 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 EFHD1Q9BUP0 239 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 COLEC11Q9BWP8 271 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 OSBPL6Q9BZF3 934 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 ADAMTS10Q9H324 1103 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 ARHGEF38Q9NXL2 777 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 Q9Y3F1 56 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 MTF2Q9Y483 593 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 PMPCBO75439 489 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 BMP10O95393 424 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 MYCP01106 439 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 CD151P48509 253 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 DNAJB13P59910 316 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 TUBA4AP68366 448 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 MAPRE2Q15555 327 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 RWDD4Q6NW29 188 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 TTC33Q6PID6 262 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 CNTN4Q8IWV2 1026 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 BBS5Q8N3I7 341 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 ANKFN1Q8N957 763 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 HM13Q8TCT9 377 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 RPL10LQ96L21 214 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 BIRC8Q96P09 236 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 SLC9A7Q96T83 725 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 MUC3BQ9H195 1237 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 WDCPQ9H6R7 721 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 FBXO5Q9UKT4 447 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 RAD54BQ9Y620 910 aa14.18□□□□□ -0.14
CLCNKA-202ENST00000375692 NRCAMQ92823 1304 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 IPO13O94829 963 aaKnown RBP14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 CPB1P15086 417 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 SOX11P35716 441 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 HCAR3P49019 387 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 DAOAP59103 153 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 ADAM17P78536 824 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 SCAPQ12770 1279 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 FAM83EQ2M2I3 478 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 TECRLQ5HYJ1 363 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF554Q86TJ5 538 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 LINC00523Q86TU6 105 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 EPHX4Q8IUS5 362 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms