RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 FAM149AA5PLN7 773 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 A8MX80 341 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 KRT7P08729 469 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 MYF5P13349 255 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 NME1P15531 152 aaKnown RBP15.68■□□□□ 0.1
SDHB-201ENST00000375499 KDELR1P24390 212 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 RENBPP51606 427 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 SUOXP51687 545 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 CYP4F3Q08477 520 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 PDK2Q15119 407 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 SMAD1Q15797 465 aaKnown RBP15.68■□□□□ 0.1
SDHB-201ENST00000375499 PROX2Q3B8N5 592 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 KCTD16Q68DU8 428 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 LIPIQ6XZB0 460 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 PELI3Q8N2H9 469 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 TEX26Q8N6G2 289 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 PLD5Q8N7P1 536 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 ZNF548Q8NEK5 533 aaPredicted RBP15.68■□□□□ 0.1
SDHB-201ENST00000375499 FAM174AQ8TBP5 190 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 MAML1Q92585 1016 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 SMIM14Q96QK8 99 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 DTLQ9NZJ0 730 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 MYLKQ15746 1914 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 CELSR3Q9NYQ7 3312 aa15.68■□□□□ 0.1
SDHB-201ENST00000375499 SETXQ7Z333 2677 aaKnown RBP15.67■□□□□ 0.1
SDHB-201ENST00000375499 LY6G6EA0A0G2JKS1 128 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 A0A0U1RQS6 177 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 LRRD1A4D1F6 860 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 CSF2P04141 144 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 HSPA9P38646 679 aaKnown RBP15.67■□□□□ 0.1
SDHB-201ENST00000375499 CAMK2BQ13554 666 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 ZFYVE27Q5T4F4 411 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 MARC1Q5VT66 337 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 ERAP2Q6P179 960 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 DPPA4Q7L190 304 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 TMPRSS12Q86WS5 348 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 RHOT2Q8IXI1 618 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 PLA2G15Q8NCC3 412 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 OR4C6Q8NH72 309 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 FUBP1Q96AE4 644 aaKnown RBP15.67■□□□□ 0.1
SDHB-201ENST00000375499 IFT43Q96FT9 208 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 RNF157Q96PX1 679 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 B4GALT6Q9UBX8 382 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 INTUQ9ULD6 942 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 U3KQA8 63 aa15.67■□□□□ 0.1
SDHB-201ENST00000375499 COL27A1Q8IZC6 1860 aaPredicted RBP15.66■□□□□ 0.1
SDHB-201ENST00000375499 CAPN8A6NHC0 703 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 SOWAHDA6NJG2 315 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 SOCS5O75159 536 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 RFPL3O75679 317 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 RECQL5O94762 991 aaPredicted RBP15.66■□□□□ 0.1
SDHB-201ENST00000375499 LCA5LO95447 670 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 PCCBP05166 539 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 HLA-DQB2P05538 268 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 CELA2BP08218 269 aaPredicted RBP15.66■□□□□ 0.1
SDHB-201ENST00000375499 TNNT1P13805 278 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 LHCGRP22888 699 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 ARHGAP25P42331 645 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 DSC2Q02487 901 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 LRRC14Q15048 493 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 AGERQ15109 404 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 TCEAL1Q15170 157 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 CNGA3Q16281 694 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 NPNTQ6UXI9 565 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 DCP2Q8IU60 420 aaKnown RBP15.66■□□□□ 0.1
SDHB-201ENST00000375499 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.66■□□□□ 0.1
SDHB-201ENST00000375499 PDCD6IPQ8WUM4 868 aaKnown RBP15.66■□□□□ 0.1
SDHB-201ENST00000375499 SPOCK2Q92563 424 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 MRFAP1L1Q96HT8 127 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 LCMT1Q9UIC8 334 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 OR1A2Q9Y585 309 aa15.66■□□□□ 0.1
SDHB-201ENST00000375499 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.65■□□□□ 0.1
SDHB-201ENST00000375499 RCCD1A6NED2 376 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 NPIPB15A6NHN6 443 aaPredicted RBP15.65■□□□□ 0.1
SDHB-201ENST00000375499 LZTS3O60299 673 aaPredicted RBP15.65■□□□□ 0.1
SDHB-201ENST00000375499 GCATO75600 419 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 PGLSO95336 258 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 CPP00450 1065 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 KRT1P04264 644 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 PDHA1P08559 390 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 ELFN1P0C7U0 828 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 JUNDP17535 347 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 COMTP21964 271 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 FECHP22830 423 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 ABCG1P45844 678 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 MARCKSL1P49006 195 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 HNRNPKP61978 463 aaKnown RBP eCLIP15.65■□□□□ 0.1
SDHB-201ENST00000375499 NIPAL4Q0D2K0 466 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 ZNF211Q13398 564 aaPredicted RBP15.65■□□□□ 0.1
SDHB-201ENST00000375499 INPP5AQ14642 412 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 IFI16Q16666 785 aaKnown RBP15.65■□□□□ 0.1
SDHB-201ENST00000375499 SLC9A4Q6AI14 798 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 ALG1LQ6GMV1 187 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 MFSD7Q6UXD7 560 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 MACC1Q6ZN28 852 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 TSPAN33Q86UF1 283 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 LRRC49Q8IUZ0 686 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 MAP7D3Q8IWC1 876 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 PHACTR4Q8IZ21 702 aa15.65■□□□□ 0.1
SDHB-201ENST00000375499 NSMCE1Q8WV22 266 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms