RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 PLK1P53350 603 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 RBM20Q5T481 1227 aaKnown RBP21.24■□□□□ 0.99
UPF3A-202ENST00000375299 AGAP9Q5VTM2 703 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 PAQR9Q6ZVX9 377 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 LIMS2Q7Z4I7 341 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 CPNE9Q8IYJ1 553 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 TERB1Q8NA31 727 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 IPMKQ8NFU5 416 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 TBC1D15Q8TC07 691 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 RSPH1Q8WYR4 309 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 SEPT8Q92599 483 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 COX4I2Q96KJ9 171 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 TSGA13Q96PP4 275 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 ULBP1Q9BZM6 244 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 FBXO5Q9UKT4 447 aa21.24■□□□□ 0.99
UPF3A-202ENST00000375299 MT-CO1P00395 513 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 TFPTP0C1Z6 253 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 PORP16435 677 aaPredicted RBP21.23■□□□□ 0.99
UPF3A-202ENST00000375299 PSMA4P25789 261 aaKnown RBP21.23■□□□□ 0.99
UPF3A-202ENST00000375299 RAB39AQ14964 217 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 DENND5AQ6IQ26 1287 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 CYHR1Q6ZMK1 362 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 ANKRD23Q86SG2 305 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 SPPL2CQ8IUH8 684 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 SLC45A3Q96JT2 553 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 HOPXQ9BPY8 73 aaPredicted RBP21.23■□□□□ 0.99
UPF3A-202ENST00000375299 FICDQ9BVA6 458 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 MUC3BQ9H195 1237 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 NXF3Q9H4D5 531 aaKnown RBP21.23■□□□□ 0.99
UPF3A-202ENST00000375299 GSTO2Q9H4Y5 243 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 FBRSL1Q9HCM7 1045 aaKnown RBP21.23■□□□□ 0.99
UPF3A-202ENST00000375299 PCDHGA4Q9Y5G9 962 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 RNF103-CHMP3A0A140T963 221 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 CXCL11O14625 94 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 HUS1O60921 280 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 PAMP19021 973 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 GPX3P22352 226 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 PNPLA4P41247 253 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 GPR107Q5VW38 600 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 CLEC6AQ6EIG7 209 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 LCN8Q6JVE9 175 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 PRMT9Q6P2P2 845 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 ARMCX2Q7L311 632 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 FASTKD5Q7L8L6 764 aaKnown RBP21.23■□□□□ 0.99
UPF3A-202ENST00000375299 CCDC117Q8IWD4 279 aaPredicted RBP21.23■□□□□ 0.99
UPF3A-202ENST00000375299 PTCD2Q8WV60 388 aaKnown RBP21.23■□□□□ 0.99
UPF3A-202ENST00000375299 PHF21BQ96EK2 531 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 LRCH3Q96II8 777 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 FEM1CQ96JP0 617 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 ADAMTS10Q9H324 1103 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 SLC38A7Q9NVC3 462 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 DDIT4Q9NX09 232 aa21.23■□□□□ 0.99
UPF3A-202ENST00000375299 ATP6AP2A0A1C7CYW4 349 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 YJEFN3A6XGL0 299 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 ATP6AP2O75787 350 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 LTA4HP09960 611 aaKnown RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 ALDOCP09972 364 aaKnown RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 C7P10643 843 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 IREB2P48200 963 aaKnown RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 DAOAP59103 153 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 BNIP2Q12982 314 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 AARS2Q5JTZ9 985 aaKnown RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 FAM219BQ5XKK7 198 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 SPRED1Q7Z699 444 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 ZNF354CQ86Y25 554 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 SLC22A9Q8IVM8 553 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 SPNS2Q8IVW8 549 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 GOLM1Q8NBJ4 401 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 CYGBQ8WWM9 190 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 CENPNQ96H22 339 aaPredicted RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 FBXL20Q96IG2 436 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 OLFM1Q99784 485 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 CD320Q9NPF0 282 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 TREX1Q9NSU2 369 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 NRCAMQ92823 1304 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 A0A1W2PPW3 197 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 UBFD1O14562 309 aaKnown RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 AURKAO14965 403 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 TPST1O60507 370 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 RBP1P09455 135 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 WARSP23381 471 aaKnown RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 AKAP5P24588 427 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 CCT8P50990 548 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 MAP3K7CLP57077 242 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 SV2CQ496J9 727 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 KIAA0930Q6ICG6 404 aaPredicted RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 ABRAXAS1Q6UWZ7 409 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 CATSPER4Q7RTX7 472 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 PGAP3Q96FM1 320 aaPredicted RBP21.22■□□□□ 0.99
UPF3A-202ENST00000375299 FCRL5Q96RD9 977 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 MED10Q9BTT4 135 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 POLR1BQ9H9Y6 1135 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 IL1RL2Q9HB29 575 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 MAP10Q9P2G4 905 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 OR12D3Q9UGF7 316 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 EGFL7Q9UHF1 273 aa21.22■□□□□ 0.99
UPF3A-202ENST00000375299 A0A0J9YYE9 177 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 TMEM221A6NGB7 291 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 NR5A2O00482 541 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 CLOCKO15516 846 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms