RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 SIN3BO75182 1162 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 NDST3O95803 873 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 EPOP01588 193 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 FGF1P05230 155 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 CHRM1P11229 460 aaPredicted RBP17.63■□□□□ 0.41
PFDN6-201ENST00000374606 PMLP29590 882 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 WASP42768 502 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 CHRNA4P43681 627 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 LIMK1P53667 647 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 MTM1Q13496 603 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 GALNT3Q14435 633 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 SLC1A5Q15758 541 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 BBS9Q3SYG4 887 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 AASDHQ4L235 1098 aaPredicted RBP17.63■□□□□ 0.41
PFDN6-201ENST00000374606 C9orf64Q5T6V5 341 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 ARMC12Q5T9G4 340 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 RANBP10Q6VN20 620 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 DSG4Q86SJ6 1040 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 CAND1Q86VP6 1230 aaKnown RBP17.63■□□□□ 0.41
PFDN6-201ENST00000374606 STK40Q8N2I9 435 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 SLC25A41Q8N5S1 370 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 FAM160A2Q8N612 972 aaPredicted RBP17.63■□□□□ 0.41
PFDN6-201ENST00000374606 LPCAT1Q8NF37 534 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 AENQ8WTP8 325 aaKnown RBP17.63■□□□□ 0.41
PFDN6-201ENST00000374606 LRIG1Q96JA1 1093 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 TRIB3Q96RU7 358 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 OSBPL1AQ9BXW6 950 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 ADGRE3Q9BY15 652 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 PIH1D1Q9NWS0 290 aaKnown RBP17.63■□□□□ 0.41
PFDN6-201ENST00000374606 CHKBQ9Y259 395 aa17.63■□□□□ 0.41
PFDN6-201ENST00000374606 CKAP5Q14008 2032 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 EIF3HO15372 352 aaKnown RBP eCLIP17.62■□□□□ 0.41
PFDN6-201ENST00000374606 SYNCRIPO60506 623 aaKnown RBP17.62■□□□□ 0.41
PFDN6-201ENST00000374606 LEFTY1O75610 366 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 PGLSO95336 258 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 KLF8O95600 359 aaPredicted RBP17.62■□□□□ 0.41
PFDN6-201ENST00000374606 PRNPP04156 253 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 UGT2B4P06133 528 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 FAM153BP0C7A2 387 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 ATXN1LP0C7T5 689 aaKnown RBP17.62■□□□□ 0.41
PFDN6-201ENST00000374606 MAGEA3P43357 314 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 SESN2P58004 480 aaPredicted RBP17.62■□□□□ 0.41
PFDN6-201ENST00000374606 PDIA2Q13087 525 aaKnown RBP17.62■□□□□ 0.41
PFDN6-201ENST00000374606 STARD3Q14849 445 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 FAM153CQ494X1 144 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 SIRPB2Q5JXA9 342 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 FNBP1LQ5T0N5 605 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 GDPD4Q6W3E5 623 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 IL17RCQ8NAC3 791 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 ZNF641Q96N77 438 aaPredicted RBP17.62■□□□□ 0.41
PFDN6-201ENST00000374606 GABRG3Q99928 467 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 SUV39H2Q9H5I1 410 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 SAYSD1Q9NPB0 183 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 PRSS16Q9NQE7 514 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 BFARQ9NZS9 450 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 PCDHB9Q9Y5E1 797 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 WASF2Q9Y6W5 498 aa17.62■□□□□ 0.41
PFDN6-201ENST00000374606 E7ESA3 106 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 TRAFD1O14545 582 aaPredicted RBP17.61■□□□□ 0.41
PFDN6-201ENST00000374606 HTRA2O43464 458 aaPredicted RBP17.61■□□□□ 0.41
PFDN6-201ENST00000374606 FZD6O60353 706 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 AVILO75366 819 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 CPP00450 1065 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 HOXB2P14652 356 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 MGAT1P26572 445 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 GRIA4P48058 902 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 EPHB1P54762 984 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 RPL26P61254 145 aaKnown RBP17.61■□□□□ 0.41
PFDN6-201ENST00000374606 SHC2P98077 582 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 DHX9Q08211 1270 aaKnown RBP17.61■□□□□ 0.41
PFDN6-201ENST00000374606 SLMAPQ14BN4 828 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 HSF5Q4G112 596 aaPredicted RBP17.61■□□□□ 0.41
PFDN6-201ENST00000374606 N4BP2L1Q5TBK1 243 aaPredicted RBP17.61■□□□□ 0.41
PFDN6-201ENST00000374606 DENND5AQ6IQ26 1287 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 Q6ZS52 159 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 ZBED8Q8IZ13 594 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 TXNDC5Q8NBS9 432 aaKnown RBP17.61■□□□□ 0.41
PFDN6-201ENST00000374606 RPLP0P6Q8NHW5 317 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 ARNT2Q9HBZ2 717 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 RPL26L1Q9UNX3 145 aaKnown RBP17.61■□□□□ 0.41
PFDN6-201ENST00000374606 SDK1Q7Z5N4 2213 aa17.61■□□□□ 0.41
PFDN6-201ENST00000374606 MYLKQ15746 1914 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 SPAG17Q6Q759 2223 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 A0A1W2PQ67 120 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 C1QTNF3-AMACRE9PGA6 284 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 BANF1O75531 89 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 PRLP01236 227 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 CTSLP07711 333 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 PDHA1P08559 390 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 HOXA6P31267 233 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 NPY2RP49146 381 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 CAMK2GQ13555 558 aaPredicted RBP17.6■□□□□ 0.41
PFDN6-201ENST00000374606 MSS51Q4VC12 460 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 ARSIQ5FYB1 569 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 EOGTQ5NDL2 527 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 TMC3Q7Z5M5 1100 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 WDR5BQ86VZ2 330 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 CAVIN3Q969G5 261 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 VOPP1Q96AW1 172 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 ECHDC3Q96DC8 303 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms