RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 CCDC162PA2VCL2 907 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 CD3EAPO15446 510 aaKnown RBP17.95■□□□□ 0.46
CTSA-204ENST00000372484 EFCAB14O75071 495 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 CRTAMO95727 393 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 LTA4HP09960 611 aaKnown RBP17.95■□□□□ 0.46
CTSA-204ENST00000372484 CCDC166P0CW27 439 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 ACRP10323 421 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 HDCP19113 662 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 AOC1P19801 751 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 PPM1AP35813 382 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 ASPHQ12797 758 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 PABPC1LQ4VXU2 614 aaKnown RBP17.95■□□□□ 0.46
CTSA-204ENST00000372484 ARL13AQ5H913 290 aaPredicted RBP17.95■□□□□ 0.46
CTSA-204ENST00000372484 EPGNQ6UW88 154 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 TMC7Q7Z402 723 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 SGF29Q96ES7 293 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 PAWRQ96IZ0 340 aaKnown RBP17.95■□□□□ 0.46
CTSA-204ENST00000372484 ZNF333Q96JL9 665 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.95■□□□□ 0.46
CTSA-204ENST00000372484 ARIH1Q9Y4X5 557 aaPredicted RBP17.95■□□□□ 0.46
CTSA-204ENST00000372484 TRIM43BA6NCK2 446 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 SPECC1L-ADORA2AF8WAN1 911 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 WFS1O76024 890 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 PIGNO95427 931 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 LATS1O95835 1130 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 CES1P23141 567 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 CCND1P24385 295 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 MPSTP25325 297 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 CCR10P46092 362 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 ARF5P84085 180 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 FSCBQ5H9T9 825 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 KLC3Q6P597 504 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 LINGO4Q6UY18 593 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 TRIM43Q96BQ3 446 aaPredicted RBP17.95■□□□□ 0.46
CTSA-204ENST00000372484 TDRD1Q9BXT4 1180 aaKnown RBP17.95■□□□□ 0.46
CTSA-204ENST00000372484 RIMKLBQ9ULI2 386 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 MAFFQ9ULX9 164 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 KIAA1671Q9BY89 1806 aa17.95■□□□□ 0.46
CTSA-204ENST00000372484 TYW5A2RUC4 315 aaKnown RBP17.94■□□□□ 0.46
CTSA-204ENST00000372484 SNAP91O60641 907 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 RAG1P15918 1043 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 RPL14P50914 215 aaKnown RBP17.94■□□□□ 0.46
CTSA-204ENST00000372484 CDKN2DP55273 166 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 E2F5Q15329 346 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 ZNF783Q6ZMS7 281 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 TMPRSS6Q8IU80 811 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 SPNS2Q8IVW8 549 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 CCNYL1Q8N7R7 359 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 GPR150Q8NGU9 434 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 OR4L1Q8NH43 312 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 C11orf49Q9H6J7 331 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 IL21Q9HBE4 155 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 MAN1C1Q9NR34 630 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 CATSPERZQ9NTU4 200 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 L3MBTL1Q9Y468 752 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 PCDHGC4Q9Y5F7 938 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 SPO11Q9Y5K1 396 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 CPQQ9Y646 472 aa17.94■□□□□ 0.46
CTSA-204ENST00000372484 KIAA0100Q14667 2235 aaKnown RBP17.94■□□□□ 0.46
CTSA-204ENST00000372484 TMCC1O94876 653 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 NCF2P19878 526 aaPredicted RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 MZF1P28698 734 aaPredicted RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 ZXDBP98169 803 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 NSUN2Q08J23 767 aaKnown RBP eCLIP17.93■□□□□ 0.46
CTSA-204ENST00000372484 PRKAA1Q13131 559 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 SLC9B1Q4ZJI4 515 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 TECRLQ5HYJ1 363 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 FAM45BPQ6NSW5 357 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 OTOP2Q7RTS6 562 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 GLT6D1Q7Z4J2 308 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 TXNDC5Q8NBS9 432 aaKnown RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 HJURPQ8NCD3 748 aaPredicted RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 FAM45AQ8TCE6 357 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 MAPK15Q8TD08 544 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 ADAMTS19Q8TE59 1207 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 TMA16Q96EY4 203 aaKnown RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 UBXN10Q96LJ8 280 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 POMKQ9H5K3 350 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 DENND2DQ9H6A0 471 aaPredicted RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 VPS28Q9UK41 221 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 RPL26L1Q9UNX3 145 aaKnown RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 MATN2O00339 956 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 PRLP01236 227 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 PDHA1P08559 390 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 ATP5F1P24539 256 aaPredicted RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 PMLP29590 882 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 SEMA3AQ14563 771 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 SDCCAG8Q86SQ7 713 aaPredicted RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 RBM15BQ8NDT2 890 aaKnown RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 LPCAT1Q8NF37 534 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 FBXO27Q8NI29 283 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 ANKRD49Q8WVL7 239 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 BHMTQ93088 406 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 CDKN2AIPNLQ96HQ2 116 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 FEM1AQ9BSK4 669 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 SHCBP1LQ9BZQ2 653 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 NLE1Q9NVX2 485 aaPredicted RBP17.93■□□□□ 0.46
CTSA-204ENST00000372484 NCKIPSDQ9NZQ3 722 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 RAI2Q9Y5P3 530 aa17.93■□□□□ 0.46
CTSA-204ENST00000372484 HDAC3O15379 428 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms