RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 RABL2BQ9UNT1 228 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 BTRCQ9Y297 605 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 RAP2CQ9Y3L5 183 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 BTAF1O14981 1849 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 PSMD11O00231 422 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 TRIM24O15164 1050 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 INPP4BO15327 924 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 DYNC1LI2O43237 492 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MED7O43513 233 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 RSL1D1O76021 490 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 BEST1O76090 585 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SIX3O95343 332 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 LDHAP00338 332 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 STAG3L1P0CL83 205 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NPR1P16066 1061 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 TPSB2P20231 275 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 AGXTP21549 392 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ACAT1P24752 427 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MAP4P27816 1152 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 HMOX2P30519 316 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MASP1P48740 699 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 RAD23AP54725 363 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NUP107P57740 925 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MERTKQ12866 999 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 IFRD2Q12894 506 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SLC13A2Q13183 592 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 GRB7Q14451 532 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 TPSAB1Q15661 275 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 KCNJ8Q15842 424 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 CLPPQ16740 277 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 FAM214AQ32MH5 1076 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 INAVAQ3KP66 663 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ESRP1Q6NXG1 681 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ZFP1Q6P2D0 407 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 CLEC14AQ86T13 490 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 PIM3Q86V86 326 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 LGI2Q8N0V4 545 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 RYBPQ8N488 228 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SHCBP1Q8NEM2 672 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SPPL2BQ8TCT7 592 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ZFP90Q8TF47 636 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 FAM151AQ8WW52 585 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 IRGQQ8WZA9 623 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SNX19Q92543 992 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SDCCAG3Q96C92 435 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 VPS50Q96JG6 964 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 TEX37Q96LM6 180 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 BIRC8Q96P09 236 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NSUN5Q96P11 429 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 HBEGFQ99075 208 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MLPHQ9BV36 600 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MRPL4Q9BYD3 311 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 BCO2Q9BYV7 579 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ANKRD60Q9BZ19 345 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 DRC3Q9H069 523 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 KLHL25Q9H0H3 589 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ADNPQ9H2P0 1102 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NANOGQ9H9S0 305 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 GOLGA2P5Q9HBQ8 144 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 DNMT3BQ9UBC3 853 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 WARS2Q9UGM6 360 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 PNMA8BQ9ULN7 279 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NUP205Q92621 2012 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 KLRG2A4D1S0 409 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 PTGES3LE9PB15 166 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ACOX3O15254 700 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 NOBOXO60393 691 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 HUS1O60921 280 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SULT1C4O75897 302 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 PGK2P07205 417 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 NFKB1P19838 968 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 UBA1P22314 1058 aaKnown RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 PRKACGP22612 351 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 MAGEA6P43360 314 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 STAT5BP51692 787 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ESRRGP62508 458 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CDK18Q07002 472 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 GALNT2Q10471 571 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 TRIM16LQ309B1 348 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ZNF829Q3KNS6 432 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 UGT3A2Q3SY77 523 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 LIPMQ5VYY2 423 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 NAPEPLDQ6IQ20 393 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 DHRS4L2Q6PKH6 230 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 RALGPS2Q86X27 583 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 DHFR2Q86XF0 187 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SLC22A15Q8IZD6 547 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SIX6OS1Q8N1H7 587 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 HEXDCQ8WVB3 486 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ANKRD49Q8WVL7 239 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 HTRA1Q92743 480 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 HDAC10Q969S8 669 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ESAMQ96AP7 390 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 NACC2Q96BF6 587 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ELMO2Q96JJ3 720 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 GLT1D1Q96MS3 346 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 GPR78Q96P69 363 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 PDGFDQ9GZP0 370 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ZNHIT2Q9UHR6 403 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CPA4Q9UI42 421 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms