RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 WDR92Q96MX6 357 aa18.99■□□□□ 0.63
TMEM53-201ENST00000372235 MGME1Q9BQP7 344 aa18.99■□□□□ 0.63
TMEM53-201ENST00000372235 PCDH18Q9HCL0 1135 aa18.99■□□□□ 0.63
TMEM53-201ENST00000372235 CTTNBP2NLQ9P2B4 639 aa18.99■□□□□ 0.63
TMEM53-201ENST00000372235 KLQ9UEF7 1012 aa18.99■□□□□ 0.63
TMEM53-201ENST00000372235 AMACRQ9UHK6 382 aa18.99■□□□□ 0.63
TMEM53-201ENST00000372235 KLF15Q9UIH9 416 aa18.99■□□□□ 0.63
TMEM53-201ENST00000372235 PHTF1Q9UMS5 762 aa18.99■□□□□ 0.63
TMEM53-201ENST00000372235 SSU72P8A0A1W2PR75 194 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 TNFRSF10CO14798 259 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 HTRA2O43464 458 aaPredicted RBP18.98■□□□□ 0.63
TMEM53-201ENST00000372235 MAFKO60675 156 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 TNFP01375 233 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 MMP13P45452 471 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 RGRP47804 291 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 KIAA1024LP59773 190 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 SLC18A3Q16572 532 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 LIPIQ6XZB0 460 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 KDM7AQ6ZMT4 941 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 ARHGAP36Q6ZRI8 547 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 KCTD6Q8NC69 237 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 FAM71BQ8TC56 605 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 ZNF670Q9BS34 389 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 LRRC61Q9BV99 259 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 COQ6Q9Y2Z9 468 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 DGKBQ9Y6T7 804 aa18.98■□□□□ 0.63
TMEM53-201ENST00000372235 ARID1BQ8NFD5 2236 aaPredicted RBP18.98■□□□□ 0.63
TMEM53-201ENST00000372235 PSMD11O00231 422 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 RECQL5O94762 991 aaPredicted RBP18.97■□□□□ 0.63
TMEM53-201ENST00000372235 PCCBP05166 539 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 TSHRP16473 764 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 CR2P20023 1033 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 CA4P22748 312 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 SRP54P61011 504 aaKnown RBP18.97■□□□□ 0.63
TMEM53-201ENST00000372235 PEX6Q13608 980 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 CDKN3Q16667 212 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 TPRG1LQ5T0D9 272 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 HID1Q8IV36 788 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 ARL10Q8N8L6 244 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 FGF11Q92914 225 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 FATE1Q969F0 183 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 XPO4Q9C0E2 1151 aaKnown RBP18.97■□□□□ 0.63
TMEM53-201ENST00000372235 DNPEPQ9ULA0 475 aa18.97■□□□□ 0.63
TMEM53-201ENST00000372235 LY6G6EA0A0G2JKS1 128 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 CPED1A4D0V7 1026 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 YY2O15391 372 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 PROSCO94903 275 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 CPP00450 1065 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 MX2P20592 715 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 MAN1A1P33908 653 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 TRIM23P36406 574 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 ABCG1P45844 678 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 SEMG2Q02383 582 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 ACOX1Q15067 660 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 ARMC12Q5T9G4 340 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 USP45Q70EL2 814 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 EFL1Q7Z2Z2 1120 aaKnown RBP18.96■□□□□ 0.63
TMEM53-201ENST00000372235 ZSWIM9Q86XI8 627 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 RBFAQ8N0V3 343 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 OR56A4Q8NGH8 313 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 SNIP1Q8TAD8 396 aaKnown RBP18.96■□□□□ 0.63
TMEM53-201ENST00000372235 PDCD6IPQ8WUM4 868 aaKnown RBP18.96■□□□□ 0.63
TMEM53-201ENST00000372235 ZNF578Q96N58 590 aaPredicted RBP18.96■□□□□ 0.63
TMEM53-201ENST00000372235 POLR1EQ9GZS1 481 aaKnown RBP18.96■□□□□ 0.63
TMEM53-201ENST00000372235 U3KQA8 63 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 SPEGQ15772 3267 aa18.96■□□□□ 0.63
TMEM53-201ENST00000372235 TDRD6O60522 2096 aaKnown RBP18.96■□□□□ 0.63
TMEM53-201ENST00000372235 IGF2RP11717 2491 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 AKAP13Q12802 2813 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 KNTC1P50748 2209 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 GOLGA4Q13439 2230 aaKnown RBP18.95■□□□□ 0.62
TMEM53-201ENST00000372235 TMX2-CTNND1H3BSU7 103 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 MUSKO15146 869 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 AKR1B10O60218 316 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 GCATO75600 419 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 PEX11BO96011 259 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 TCF4P15884 667 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 CCNCP24863 283 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 VIPR1P32241 457 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 EIF2S3P41091 472 aaKnown RBP18.95■□□□□ 0.62
TMEM53-201ENST00000372235 RALGDSQ12967 914 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 ARHGEF7Q14155 803 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 PAFAH1B3Q15102 231 aaKnown RBP18.95■□□□□ 0.62
TMEM53-201ENST00000372235 IFI16Q16666 785 aaKnown RBP18.95■□□□□ 0.62
TMEM53-201ENST00000372235 ALG11Q2TAA5 492 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 RBM44Q6ZP01 1051 aaKnown RBP18.95■□□□□ 0.62
TMEM53-201ENST00000372235 RAVER1Q8IY67 606 aaKnown RBP18.95■□□□□ 0.62
TMEM53-201ENST00000372235 TEX26Q8N6G2 289 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 HNRNPLLQ8WVV9 542 aaKnown RBP18.95■□□□□ 0.62
TMEM53-201ENST00000372235 SCRN2Q96FV2 425 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 BTBD6Q96KE9 485 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 ZNF830Q96NB3 372 aaPredicted RBP18.95■□□□□ 0.62
TMEM53-201ENST00000372235 DNAJC7Q99615 494 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 WDR26Q9H7D7 661 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 ETNK2Q9NVF9 386 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 PADI4Q9UM07 663 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 OR1A2Q9Y585 309 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 PCDHGC4Q9Y5F7 938 aa18.95■□□□□ 0.62
TMEM53-201ENST00000372235 CSO75390 466 aaKnown RBP18.94■□□□□ 0.62
TMEM53-201ENST00000372235 DXOO77932 396 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms