RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CEP70Q8NHQ1 597 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 BLOC1S5Q8TDH9 187 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 RCN3Q96D15 328 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 FAR2Q96K12 515 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 TBATAQ96M53 351 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 SERPINI1Q99574 410 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 ECSITQ9BQ95 431 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP29.06■■■□□ 2.242e-7■□□□□ 10.3
SSBP3-204ENST00000371320 COPG1Q9Y678 874 aaKnown RBP29.06■■■□□ 2.24
SSBP3-204ENST00000371320 F5H5T6 163 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 FGF1P05230 155 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 MTA1Q13330 715 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 LAMB3Q13751 1172 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 CAPRIN2Q6IMN6 1127 aaKnown RBP29.05■■■□□ 2.24
SSBP3-204ENST00000371320 CFAP52Q8N1V2 620 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 AFAP1L2Q8N4X5 818 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 PHF21BQ96EK2 531 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 SUDS3Q9H7L9 328 aaPredicted RBP29.05■■■□□ 2.24
SSBP3-204ENST00000371320 FIS1Q9Y3D6 152 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 BUD23O43709 281 aaKnown RBP29.05■■■□□ 2.24
SSBP3-204ENST00000371320 PLK1P53350 603 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 SATB1Q01826 763 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 SLC22A9Q8IVM8 553 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 STK39Q9UEW8 545 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 LRFN2Q9ULH4 789 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 CRYL1Q9Y2S2 319 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 ARL5AQ9Y689 179 aa29.05■■■□□ 2.24
SSBP3-204ENST00000371320 NT5C1B-RDH14C9J2C7 533 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 H7C4K7 107 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 TBC1D4O60343 1298 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 NBNO60934 754 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 GLP2RO95838 553 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 SLC26A3P40879 764 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 ACVR1Q04771 509 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 GPR158Q5T848 1215 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 FAM45BPQ6NSW5 357 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 TMEM154Q6P9G4 183 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 TMEM207Q6UWW9 146 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 FAM45AQ8TCE6 357 aa29.04■■■□□ 2.24
SSBP3-204ENST00000371320 SLC38A8A6NNN8 435 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 SKAP2O75563 359 aaPredicted RBP29.03■■■□□ 2.24
SSBP3-204ENST00000371320 EPOP01588 193 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 HOXD10P28358 340 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 GALNT3Q14435 633 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 RNF111Q6ZNA4 994 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 RAET1EQ8TD07 263 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 DNAJC1Q96KC8 554 aaKnown RBP29.03■■■□□ 2.24
SSBP3-204ENST00000371320 ZNF599Q96NL3 588 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 ALG9Q9H6U8 611 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 PDFQ9HBH1 243 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 ARVCFO00192 962 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 WISP3O95389 354 aaPredicted RBP29.03■■■□□ 2.24
SSBP3-204ENST00000371320 GOT2P00505 430 aaKnown RBP29.03■■■□□ 2.24
SSBP3-204ENST00000371320 ELAVL2Q12926 359 aaKnown RBP29.03■■■□□ 2.24
SSBP3-204ENST00000371320 BNC2Q6ZN30 1099 aaPredicted RBP29.03■■■□□ 2.24
SSBP3-204ENST00000371320 CUZD1Q86UP6 607 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 HHIPL1Q96JK4 782 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 CDRT15Q96T59 188 aa29.03■■■□□ 2.24
SSBP3-204ENST00000371320 CD3EAPO15446 510 aaKnown RBP29.02■■■□□ 2.24
SSBP3-204ENST00000371320 SLC4A1P02730 911 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 SP100P23497 879 aaPredicted RBP29.02■■■□□ 2.24
SSBP3-204ENST00000371320 CDC16Q13042 620 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 BTG3Q14201 252 aaPredicted RBP29.02■■■□□ 2.24
SSBP3-204ENST00000371320 PTPRCAPQ14761 206 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 MRNIPQ6NTE8 343 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 RPS27LQ71UM5 84 aaKnown RBP29.02■■■□□ 2.24
SSBP3-204ENST00000371320 PIM3Q86V86 326 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 KBTBD6Q86V97 674 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 C2orf15Q8WU43 125 aaKnown RBP29.02■■■□□ 2.24
SSBP3-204ENST00000371320 PEX13Q92968 403 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 EFCAB1Q9HAE3 211 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 PACSIN3Q9UKS6 424 aa29.02■■■□□ 2.24
SSBP3-204ENST00000371320 A0A0D9SEW6 157 aa29.01■■■□□ 2.24
SSBP3-204ENST00000371320 SERPINF2P08697 491 aa29.01■■■□□ 2.24
SSBP3-204ENST00000371320 ART3Q13508 389 aa29.01■■■□□ 2.24
SSBP3-204ENST00000371320 LHX8Q68G74 356 aa29.01■■■□□ 2.24
SSBP3-204ENST00000371320 ANKS3Q6ZW76 656 aa29.01■■■□□ 2.24
SSBP3-204ENST00000371320 TAS1R1Q7RTX1 841 aa29.01■■■□□ 2.24
SSBP3-204ENST00000371320 SDCCAG8Q86SQ7 713 aaPredicted RBP29.01■■■□□ 2.24
SSBP3-204ENST00000371320 BRSK1Q8TDC3 778 aa29.01■■■□□ 2.24
SSBP3-204ENST00000371320 ADAMTS6Q9UKP5 1117 aa29.01■■■□□ 2.24
SSBP3-204ENST00000371320 RPP40O75818 363 aaKnown RBP29.01■■■□□ 2.23
SSBP3-204ENST00000371320 RAG1P15918 1043 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 ILF2Q12905 390 aaKnown RBP29.01■■■□□ 2.23
SSBP3-204ENST00000371320 ISCA2Q86U28 154 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 BBS5Q8N3I7 341 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 GPR150Q8NGU9 434 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 CD99L2Q8TCZ2 262 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 SPDL1Q96EA4 605 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 TTPALQ9BTX7 342 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 TNFRSF12AQ9NP84 129 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 DNMT3LQ9UJW3 386 aa29.01■■■□□ 2.23
SSBP3-204ENST00000371320 CCDC162PA2VCL2 907 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 DPPA5A6NC42 116 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 ACSL4O60488 711 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 PIRTP0C851 137 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 ENO3P13929 434 aaPredicted RBP29■■■□□ 2.23
SSBP3-204ENST00000371320 ATF6P18850 670 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 IMPDH1P20839 514 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 SLC6A4P31645 630 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms