RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 KCTD11Q693B1 232 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 NAPEPLDQ6IQ20 393 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 PRR23BQ6ZRT6 265 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 LINC00523Q86TU6 105 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 HORMAD1Q86X24 394 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 KLHL7Q8IXQ5 586 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 TMEFF1Q8IYR6 380 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 CXorf40AQ8TE69 158 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 LOXL4Q96JB6 756 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 ETNK1Q9HBU6 452 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 NEU2Q9Y3R4 380 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 ANKRD36A6QL64 1941 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 FGF1P05230 155 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 ZNF30P17039 623 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 VIPR1P32241 457 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 ADRA1AP35348 466 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 DR1Q01658 176 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 GALNT3Q14435 633 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 PPP1R7Q15435 360 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 SLC1A5Q15758 541 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 QPCTQ16769 361 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 RANBP10Q6VN20 620 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 KDELC2Q7Z4H8 507 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 PRUNE1Q86TP1 453 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 RAVER1Q8IY67 606 aaKnown RBP15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 MNS1Q8NEH6 495 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 ASB12Q8WXK4 309 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 BIRC7Q96CA5 298 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 ARNT2Q9HBZ2 717 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 MAGEE1Q9HCI5 957 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 EIF2B3Q9NR50 452 aaKnown RBP15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 B4GALT6Q9UBX8 382 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 ITM2BQ9Y287 266 aa15.6■□□□□ 0.09
PRPF38B-202ENST00000370022 FANCMQ8IYD8 2048 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 A0A1W2PQU0 124 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 PRR23AA6NEV1 266 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 MEI4A8MW99 385 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 PSMD11O00231 422 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 SUN1O94901 812 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 FSBPO95073 299 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 PRKCGP05129 697 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 IGHV4-34P06331 123 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 ATXN1LP0C7T5 689 aaKnown RBP15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 ELFN1P0C7U0 828 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 HNF1BP35680 557 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 LMAN1P49257 510 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 BASP1P80723 227 aaKnown RBP15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 PTK6Q13882 451 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 ARHGEF7Q14155 803 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 TMEM259Q4ZIN3 620 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 SETMARQ53H47 684 aaPredicted RBP15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 SIRPB2Q5JXA9 342 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 FAXCQ5TGI0 409 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 LYSMD4Q5XG99 296 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 SLC41A1Q8IVJ1 513 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 PDCD7Q8N8D1 485 aaKnown RBP15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 HSPA12BQ96MM6 686 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 TBL1YQ9BQ87 522 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 FICDQ9BVA6 458 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 KCTD5Q9NXV2 234 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 GGT7Q9UJ14 662 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 DMTF1Q9Y222 760 aa15.59■□□□□ 0.09
PRPF38B-202ENST00000370022 NPIPB15A6NHN6 443 aaPredicted RBP15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 TM7SF2O76062 418 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 AGTP01019 485 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 APRTP07741 180 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 ALPIP09923 528 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 CTPS1P17812 591 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 ITIH2P19823 946 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 PTGIRP43119 386 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 DHPSP49366 369 aaPredicted RBP15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 PPP2CBP62714 309 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 PPP2CAP67775 309 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 CDK16Q00536 496 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 RALGDSQ12967 914 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 GPS1Q13098 491 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 SGCGQ13326 291 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 TRIP13Q15645 432 aaPredicted RBP15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 ZNF284Q2VY69 593 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 MAATS1Q7Z4T9 603 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 DNASE2BQ8WZ79 361 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 KRT12Q99456 494 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 C1QTNF7Q9BXJ2 289 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 C1QTNF2Q9BXJ5 285 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 TRABDQ9H4I3 376 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 HACD3Q9P035 362 aa15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 SMG5Q9UPR3 1016 aaKnown RBP15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 ZFR2Q9UPR6 939 aaKnown RBP15.58■□□□□ 0.09
PRPF38B-202ENST00000370022 A0A1W2PPC4 97 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 AP3B1O00203 1094 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 MMP20O60882 483 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 HEXIM1O94992 359 aaKnown RBP15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 TPSB2P20231 275 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 CD27P26842 260 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 HOXD12P35452 270 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 PTGER3P43115 390 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 LIG3P49916 1009 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 AGERQ15109 404 aa15.58■□□□□ 0.08
PRPF38B-202ENST00000370022 TPSAB1Q15661 275 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms