RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 RHOBTB2Q9BYZ6 727 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 EBF3Q9H4W6 596 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 Q9H521 79 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 CORO2BQ9UQ03 480 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 NEU2Q9Y3R4 380 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 ARAP2Q8WZ64 1704 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 CXorf51AA0A1B0GTR3 108 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 CPED1A4D0V7 1026 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 EVPLLA8MZ36 301 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 SLC35G6P0C7Q6 338 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 HOXB6P17509 224 aaKnown RBP8.33□□□□□ -1.08
SSR2-202ENST00000368311 HOXD12P35452 270 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 CSKP41240 450 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 HTRA4P83105 476 aaPredicted RBP8.33□□□□□ -1.08
SSR2-202ENST00000368311 PPP3CAQ08209 521 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 PDE1CQ14123 709 aaPredicted RBP8.33□□□□□ -1.08
SSR2-202ENST00000368311 TAF1AQ15573 450 aaPredicted RBP8.33□□□□□ -1.08
SSR2-202ENST00000368311 INO80DQ53TQ3 878 aaPredicted RBP8.33□□□□□ -1.08
SSR2-202ENST00000368311 ZNF805Q5CZA5 627 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 CEP85LQ5SZL2 805 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 CLEC20AQ6ZU45 233 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 HTR3DQ70Z44 454 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 CYP4Z1Q86W10 505 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSR2-202ENST00000368311 TMIEQ8NEW7 156 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 ZNF398Q8TD17 642 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 PRRG3Q9BZD7 231 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 SHCBP1LQ9BZQ2 653 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 IL1RAPL1Q9NZN1 696 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 GPR34Q9UPC5 381 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 RAI2Q9Y5P3 530 aa8.33□□□□□ -1.08
SSR2-202ENST00000368311 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.33□□□□□ -1.089e-8■□□□□ 9.5
SSR2-202ENST00000368311 ENDOD1O94919 500 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 CBSLP0DN79 551 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 LAMP2P13473 410 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 CBSP35520 551 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 MLLT6P55198 1093 aaPredicted RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 ART3Q13508 389 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.32□□□□□ -1.08
SSR2-202ENST00000368311 ANKRD20A4Q4UJ75 823 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 ANKRD20A2Q5SQ80 823 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 ANKRD20A1Q5TYW2 823 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 SDHAF4Q5VUM1 108 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 KIAA0895LQ68EN5 471 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 WDR59Q6PJI9 974 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 ZNF276Q8N554 614 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 SLC4A11Q8NBS3 891 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 RNF217Q8TC41 542 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 MS4A14Q96JA4 679 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 IP6K3Q96PC2 410 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 GFM1Q96RP9 751 aaKnown RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 TMEM9BQ9NQ34 198 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 SDHAF3Q9NRP4 125 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 FZD4Q9ULV1 537 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 HCFC2Q9Y5Z7 792 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 WNT6Q9Y6F9 365 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 KCNE2Q9Y6J6 123 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 RPS6KL1Q9Y6S9 549 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 A6NCN8 305 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 C5orf67F2Z3F1 127 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 CFLARO15519 480 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 SLC8A1P32418 973 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 GPC1P35052 558 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 CAPZA2P47755 286 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 CCNG1P51959 295 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 PMS2P54278 862 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 CSE1LP55060 971 aaKnown RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 OTUD4Q01804 1114 aaKnown RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 BIKQ13323 160 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 CSHL1Q14406 222 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 SPDYAQ5MJ70 313 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 LY6G5CQ5SRR4 150 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 STXBP5Q5T5C0 1151 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 KIAA0319Q5VV43 1072 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 KHDRBS2Q5VWX1 349 aaKnown RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 TAC4Q86UU9 113 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 FAM71DQ8N9W8 422 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 DMAC2Q9NW81 257 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 TMEM248Q9NWD8 314 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 MYBPHLA2RUH7 354 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 AGPSO00116 658 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 CLDN5O00501 218 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 GNGT2O14610 69 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 EPCAMP16422 314 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 HNRNPA2B1P22626 353 aaKnown RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 ASPAP45381 313 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 UCNP55089 124 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 BNC1Q01954 994 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 MSLNQ13421 630 aaPredicted RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 SLC14A2Q15849 920 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 FAM214AQ32MH5 1076 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 ENPP7Q6UWV6 458 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 ABHD13Q7L211 337 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 LNX1Q8TBB1 728 aaPredicted RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 USP7Q93009 1102 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 ISG20Q96AZ6 181 aaKnown RBP8.32□□□□□ -1.08
SSR2-202ENST00000368311 RAD51AP1Q96B01 352 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 RNF157Q96PX1 679 aa8.32□□□□□ -1.08
SSR2-202ENST00000368311 SLC4A5Q9BY07 1137 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms