RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 NFATC4Q14934 902 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ALG11Q2TAA5 492 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ATP13A4Q4VNC1 1196 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PRRT3Q5FWE3 981 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 C6orf132Q5T0Z8 1188 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 KCTD16Q68DU8 428 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 GUSBP11Q6P575 273 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 C19orf48Q6RUI8 117 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CPNE8Q86YQ8 564 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TEX26Q8N6G2 289 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 IFI44Q8TCB0 444 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NUDCD1Q96RS6 583 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ASXL3Q9C0F0 2248 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SOCS5O75159 536 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 RECQL5O94762 991 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CELA2BP08218 269 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 HOXC4P09017 264 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TGM2P21980 687 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 EIF2S3P41091 472 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CDH6P55285 790 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MMRN1Q13201 1228 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 DPYSL3Q14195 570 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PAFAH1B3Q15102 231 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NFKBIBQ15653 356 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SLC18A3Q16572 532 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CDKN3Q16667 212 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 COL28A1Q2UY09 1125 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 RALGPS1Q5JS13 557 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CFAP58Q5T655 872 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 FAXCQ5TGI0 409 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LRRC49Q8IUZ0 686 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SLC35F3Q8IY50 421 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PELI3Q8N2H9 469 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SDR16C5Q8N3Y7 309 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ZNF564Q8TBZ8 553 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 HNRNPLLQ8WVV9 542 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 FUBP1Q96AE4 644 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 COQ10AQ96MF6 247 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 IL12RB2Q99665 862 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SLC13A1Q9BZW2 595 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NOD2Q9HC29 1040 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PPIL1Q9Y3C6 166 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 OR1A2Q9Y585 309 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PCDHB1Q9Y5F3 818 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PCDHGC4Q9Y5F7 938 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 DGKBQ9Y6T7 804 aa13.73□□□□□ -0.21
TNFRSF1A-202ENST00000366159 A0A1W2PQ67 120 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 FZD6O60353 706 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PROSCO94903 275 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SERPINB6P35237 376 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 BLKP51451 505 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 KIAA1024LP59773 190 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TRAF2Q12933 501 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ZNF235Q14590 738 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 IHHQ14623 411 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PERM1Q5SV97 790 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NCBP2-AS2Q69YL0 99 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ALG1LQ6GMV1 187 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ESRP1Q6NXG1 681 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ENPP7Q6UWV6 458 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 FSTL5Q8N475 847 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 OR8K1Q8NGG5 319 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PCDH19Q8TAB3 1148 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SNIP1Q8TAD8 396 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MAML1Q92585 1016 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 FATE1Q969F0 183 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TSACCQ96A04 125 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 FAF2Q96CS3 445 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PACSIN1Q9BY11 444 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 EVA1BQ9NVM1 165 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 UVRAGQ9P2Y5 699 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 B4GALT6Q9UBX8 382 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 BPTFQ12830 3046 aa13.72□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TMEM202A6NGA9 273 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MFSD11O43934 449 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PCCBP05166 539 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ANXA6P08133 673 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ELFN1P0C7U0 828 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LHCGRP22888 699 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 HTR1BP28222 390 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TAS2R40P59535 323 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SRP54P61011 504 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MAXP61244 160 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 GALNT2Q10471 571 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NR0B2Q15466 257 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SKOR2Q2VWA4 1001 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ANKRD20A8PQ5CZ79 823 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MARC1Q5VT66 337 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SPECC1LQ69YQ0 1117 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PNCKQ6P2M8 343 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 EFL1Q7Z2Z2 1120 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ATPAF2Q8N5M1 289 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MAPK15Q8TD08 544 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PIH1D2Q8WWB5 315 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SCRN2Q96FV2 425 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 WDR92Q96MX6 357 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms