RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 NADKO95544 446 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 CLPTM1O96005 669 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 RAF1P04049 648 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 CTAGE8P0CG41 777 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 IGFBP2P18065 325 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 BTF3P20290 206 aaKnown RBP-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 S1PR1P21453 382 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 GTF2F1P35269 517 aaKnown RBP eCLIP-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 ISL1P61371 349 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 EEF1A1P68104 462 aaKnown RBP-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 RBL2Q08999 1139 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 FAM27E3Q08E93 113 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 CHAF1AQ13111 956 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 GTF2H2Q13888 395 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 FGL2Q14314 439 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 P3H1Q32P28 736 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 INAVAQ3KP66 663 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 EEF1A1P5Q5VTE0 462 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 NCAPH2Q6IBW4 605 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 GTF2H2CQ6P1K8 395 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 Q6P435 159 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 FAM171BQ6P995 826 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 TLDC1Q6P9B6 456 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 IL27RAQ6UWB1 636 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 Q6ZS52 159 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 ASB18Q6ZVZ8 466 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 C16orf86Q6ZW13 317 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 USP45Q70EL2 814 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 ANO5Q75V66 913 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 C11orf96Q7Z7L8 435 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 DENND1CQ8IV53 801 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 CTAGE4Q8IX94 777 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 RNF113BQ8IZP6 322 aaKnown RBP-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 MIER2Q8N344 545 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 RHOXF1Q8NHV9 184 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 ARRDC2Q8TBH0 407 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 FAR1Q8WVX9 515 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 STAMQ92783 540 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 ESAMQ96AP7 390 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 NT5C1BQ96P26 610 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 ZNF670Q9BS34 389 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 PCDH9Q9HC56 1237 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 SIX2Q9NPC8 291 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 MKKSQ9NPJ1 570 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 IL17CQ9P0M4 197 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 HERC5Q9UII4 1024 aaKnown RBP-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 OR2W1Q9Y3N9 320 aa-0.15□□□□□ -2.43
RNU6-340P-201ENST00000364005 CCNT2O60583 730 aaKnown RBP-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 INMTO95050 263 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 WISP3O95389 354 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 MT-CO1P00395 513 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 ALDOAP04075 364 aaKnown RBP-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 HOXD4P09016 255 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 ARP10275 920 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 KITP10721 976 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 VDRP11473 427 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 CD99P14209 185 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 MYOD1P15172 320 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 STX2P32856 288 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 PIGAP37287 484 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 WNT5AP41221 380 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 MAPK9P45984 424 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 ARHGAP8P85298 464 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 DRP2Q13474 957 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 EBI3Q14213 229 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 LPIN1Q14693 890 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 PTPN21Q16825 1174 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 CCDC96Q2M329 555 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 WSCD2Q2TBF2 565 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 PGS1Q32NB8 556 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 GTDC1Q4AE62 458 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 TFDP3Q5H9I0 405 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 CELF3Q5SZQ8 465 aaKnown RBP-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 GPATCH4Q5T3I0 446 aaKnown RBP-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 TMEM88Q6PEY1 159 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 KRT27Q7Z3Y8 459 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 ANKS1BQ7Z6G8 1248 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 TMEM200AQ86VY9 491 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 HOMER1Q86YM7 354 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 ZNF34Q8IZ26 560 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 MAML2Q8IZL2 1156 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 Q8N9L7 120 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 POC5Q8NA72 575 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 Q8NBF4 154 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 HDAC7Q8WUI4 952 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 PDLIM5Q96HC4 596 aaKnown RBP-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 MAGED4Q96JG8 741 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 NSMCE3Q96MG7 304 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 NEUROD6Q96NK8 337 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 ZNF577Q9BSK1 485 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 STK33Q9BYT3 514 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 SLC13A1Q9BZW2 595 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 SLC39A8Q9C0K1 460 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 Q9N2J8 555 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 FBXO28Q9NVF7 368 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 MCM9Q9NXL9 1143 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 KLHL42Q9P2K6 505 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 KLK12Q9UKR0 248 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 CAPN11Q9UMQ6 739 aa-0.16□□□□□ -2.44
RNU6-340P-201ENST00000364005 AMDHD2Q9Y303 409 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms