RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PTPRNQ16849 979 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 EFL1Q7Z2Z2 1120 aaKnown RBP12.32□□□□□ -0.44
COL20A1-201ENST00000358894 MON1AQ86VX9 555 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 FBXO27Q8NI29 283 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 METTL6Q8TCB7 284 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 ZFAND2BQ8WV99 257 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 HIST1H2AHQ96KK5 128 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 HIST1H2AJQ99878 128 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 H2AFJQ9BTM1 129 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 CXCL16Q9H2A7 254 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 SLC2A6Q9UGQ3 507 aa12.32□□□□□ -0.44
COL20A1-201ENST00000358894 TRIM38O00635 465 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 IPO13O94829 963 aaKnown RBP12.31□□□□□ -0.44
COL20A1-201ENST00000358894 STAU1O95793 577 aaKnown RBP12.31□□□□□ -0.44
COL20A1-201ENST00000358894 KRT8P05787 483 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 UQCRBP14927 111 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 VCLP18206 1134 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 CCNCP24863 283 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 DDX39BQ13838 428 aaKnown RBP12.31□□□□□ -0.44
COL20A1-201ENST00000358894 HECTD2Q5U5R9 776 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 NTAN1Q96AB6 310 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 B3GALT6Q96L58 329 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 FCRL3Q96P31 734 aaPredicted RBP12.31□□□□□ -0.44
COL20A1-201ENST00000358894 SYT17Q9BSW7 474 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 F2P00734 622 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 FASP25445 335 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 CDK18Q07002 472 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 SPRYD7Q5W111 196 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 TLDC1Q6P9B6 456 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 FAM162AQ96A26 154 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 KCTD14Q9BQ13 255 aaPredicted RBP12.31□□□□□ -0.44
COL20A1-201ENST00000358894 HGH1Q9BTY7 390 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 BEGAINQ9BUH8 593 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 SPAG4Q9NPE6 437 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 SEPT3Q9UH03 358 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 SMIM31A0A1B0GVY4 71 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 STX16-NPEPL1H3BU86 382 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 MATN3O15232 486 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 AHSGP02765 367 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 CKMP06732 381 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 LINC00032P0C843 101 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 TAF10Q12962 218 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 SQLEQ14534 574 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 ARHGAP36Q6ZRI8 547 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 GIPC3Q8TF64 312 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 KBTBD7Q8WVZ9 684 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 DLG3Q92796 817 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 ZNF778Q96MU6 729 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 ACBD6Q9BR61 282 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 ADGRE3Q9BY15 652 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 OXCT2Q9BYC2 517 aaPredicted RBP12.31□□□□□ -0.44
COL20A1-201ENST00000358894 PARVBQ9HBI1 364 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 GIMAP4Q9NUV9 329 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 MOCS1Q9NZB8 636 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 LMCD1Q9NZU5 365 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 ZMYM5Q9UJ78 669 aa12.31□□□□□ -0.44
COL20A1-201ENST00000358894 C15orf38-AP3S2A0A0A6YYH1 394 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 LINC00854A0A1B0GVQ3 168 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 OR51F1A6NGY5 319 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TBKBP1A7MCY6 615 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TLR5O60602 858 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 LBPP18428 481 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 ABL2P42684 1182 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 CXCR3P49682 368 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 SREBF2Q12772 1141 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 PAFAH1B3Q15102 231 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 RPS27LQ71UM5 84 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 ARPINQ7Z6K5 226 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 PSMG2Q969U7 264 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 DCUN1D1Q96GG9 259 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 C1orf50Q9BV19 199 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 RUBCNLQ9H714 662 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 EURLQ9NYK6 297 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 DNAJC25-GNG10A0A024R161 153 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 A0A1B0GVG6 124 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 MYO1GB0I1T2 1018 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 ADCY6O43306 1168 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 FAM189A1O60320 539 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 CCNT2O60583 730 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TBX18O95935 607 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 KCNE1P15382 129 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 ATN1P54259 1190 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 FAM45BPQ6NSW5 357 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 RBM12BQ8IXT5 1001 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 STAG3L4Q8TBR4 150 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 FAM45AQ8TCE6 357 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 RMND5BQ96G75 393 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TM6SF2Q9BZW4 377 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 SENP6Q9GZR1 1112 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 C6orf203Q9P0P8 240 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 LSM7Q9UK45 103 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 PAX3P23760 479 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 FLT3LGP49771 235 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms