RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 GDAP1Q8TB36 358 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 WFIKKN2Q8TEU8 576 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 RSRC1Q96IZ7 334 aaKnown RBP13.36□□□□□ -0.27
NFIX-201ENST00000358552 LMLNQ96KR4 655 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 TMEM237Q96Q45 408 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 BBS2Q9BXC9 721 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 ATP13A3Q9H7F0 1226 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 MANSC1Q9H8J5 431 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 MAGEE1Q9HCI5 957 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 ARHGEF3Q9NR81 526 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 ABCF3Q9NUQ8 709 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 THG1LQ9NWX6 298 aaKnown RBP13.36□□□□□ -0.27
NFIX-201ENST00000358552 LHX3Q9UBR4 397 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 BAIAP2L1Q9UHR4 511 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 FBXO5Q9UKT4 447 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 MIA3Q5JRA6 1907 aa13.36□□□□□ -0.27
NFIX-201ENST00000358552 PRRC2BQ5JSZ5 2229 aaKnown RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 EPOPA6NHQ4 379 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 GOLGA8RI6L899 631 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 TPP1O14773 563 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 PER2O15055 1255 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 SNAP91O60641 907 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 UGT1A9O60656 530 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 GLP2RO95838 553 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 ADH1CP00326 375 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 ALDOAP04075 364 aaKnown RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 ASLP04424 464 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 LPOP22079 712 aaPredicted RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 GLDCP23378 1020 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 CHRNA4P43681 627 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 SERPINB4P48594 390 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 PTPN5P54829 565 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 BCL2L1Q07817 233 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 E2F5Q15329 346 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 SLC5A9Q2M3M2 681 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 TSNAXIP1Q2TAA8 658 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 LRIT3Q3SXY7 679 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 PITRM1Q5JRX3 1037 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 KDELC2Q7Z4H8 507 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 TBC1D1Q86TI0 1168 aaPredicted RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 UNC5BQ8IZJ1 945 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 DCLK2Q8N568 766 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 BLOC1S5Q8TDH9 187 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 ZNF75CPQ92670 426 aaPredicted RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 MRPL38Q96DV4 380 aaKnown RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 LRRC37BQ96QE4 947 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 CPEB1Q9BZB8 566 aaKnown RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 SLC13A1Q9BZW2 595 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 UGT1A7Q9HAW7 530 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 UGT1A10Q9HAW8 530 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 UGT1A8Q9HAW9 530 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 TRPV4Q9HBA0 871 aa13.35□□□□□ -0.27
NFIX-201ENST00000358552 NLE1Q9NVX2 485 aaPredicted RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 HELZP42694 1942 aaKnown RBP13.35□□□□□ -0.27
NFIX-201ENST00000358552 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 A0A087X1B8 175 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 FZD6O60353 706 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 SNUPNO95149 360 aaKnown RBP13.34□□□□□ -0.27
NFIX-201ENST00000358552 UNC5CO95185 931 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 TGDSO95455 350 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 AHSGP02765 367 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 PABPC1P11940 636 aaKnown RBP13.34□□□□□ -0.27
NFIX-201ENST00000358552 SERPINA4P29622 427 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 EPHB1P54762 984 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 BMPR2Q13873 1038 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 KCNC3Q14003 757 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 AARS2Q5JTZ9 985 aaKnown RBP13.34□□□□□ -0.27
NFIX-201ENST00000358552 AFTPHQ6ULP2 937 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 KIAA0907Q7Z7F0 614 aaPredicted RBP13.34□□□□□ -0.27
NFIX-201ENST00000358552 RBM23Q86U06 439 aaKnown RBP13.34□□□□□ -0.27
NFIX-201ENST00000358552 OR2AP1Q8NGE2 309 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 OR13J1Q8NGT2 312 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 OR6P1Q8NGX9 317 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 RDH11Q8TC12 318 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 OSCP1Q8WVF1 389 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 ZNF778Q96MU6 729 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 ZNF641Q96N77 438 aaPredicted RBP13.34□□□□□ -0.27
NFIX-201ENST00000358552 FAM111AQ96PZ2 611 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 AGAP2Q99490 1192 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 TTC1Q99614 292 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 SAR1AQ9NR31 198 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 SNX15Q9NRS6 342 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 PCMTD2Q9NV79 361 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 INTS10Q9NVR2 710 aaKnown RBP13.34□□□□□ -0.27
NFIX-201ENST00000358552 NOP53Q9NZM5 478 aaKnown RBP13.34□□□□□ -0.27
NFIX-201ENST00000358552 CHKBQ9Y259 395 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 PSAT1Q9Y617 370 aa13.34□□□□□ -0.27
NFIX-201ENST00000358552 GOLGA8CPA6NN73 597 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 H7C0S8 307 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 HTRA2O43464 458 aaPredicted RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 EDF1O60869 148 aaKnown RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 H2AFYO75367 372 aaKnown RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 NFATC1O95644 943 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 POP4O95707 220 aaKnown RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 ATP5BP06576 529 aaKnown RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 TYRP14679 529 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 STMN1P16949 149 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms