RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RPL26P61254 145 aaKnown RBP25.5■■□□□ 1.67
SSBP3-202ENST00000357475 CRADDP78560 199 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 LRRC8BQ6P9F7 803 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 MAMSTRQ6ZN01 415 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 LINC00523Q86TU6 105 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 TSPAN33Q86UF1 283 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 MAML2Q8IZL2 1156 aaPredicted RBP25.5■■□□□ 1.67
SSBP3-202ENST00000357475 FRMD1Q8N878 549 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 DNAAF3Q8N9W5 541 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 BBOF1Q8ND07 529 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 OMDQ99983 421 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 B4GALT6Q9UBX8 382 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 RPL26L1Q9UNX3 145 aaKnown RBP25.5■■□□□ 1.67
SSBP3-202ENST00000357475 ALDH1A2O94788 518 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 ACADMP11310 421 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 FAM193AP78312 1265 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 ZBTB16Q05516 673 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 GSPT2Q8IYD1 628 aaKnown RBP25.49■■□□□ 1.67
SSBP3-202ENST00000357475 MPP5Q8N3R9 675 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 RLN3Q8WXF3 142 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 FAM131CQ96AQ9 280 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 PRMT8Q9NR22 394 aaPredicted RBP25.49■■□□□ 1.67
SSBP3-202ENST00000357475 FAM114A2Q9NRY5 505 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 USP36Q9P275 1121 aaKnown RBP25.49■■□□□ 1.67
SSBP3-202ENST00000357475 PPIL1Q9Y3C6 166 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 DOCK9Q9BZ29 2069 aa25.49■■□□□ 1.67
SSBP3-202ENST00000357475 CAPN8A6NHC0 703 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 PAPSS2O95340 614 aaPredicted RBP25.48■■□□□ 1.67
SSBP3-202ENST00000357475 LHCGRP22888 699 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 MGAT1P26572 445 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 MAGEA3P43357 314 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 TNNT3P45378 269 aaPredicted RBP25.48■■□□□ 1.67
SSBP3-202ENST00000357475 CDH17Q12864 832 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 RALGDSQ12967 914 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 CDKN3Q16667 212 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 TTC31Q49AM3 519 aaPredicted RBP25.48■■□□□ 1.67
SSBP3-202ENST00000357475 IFT20Q8IY31 132 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 DTWD2Q8NBA8 298 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 BLOC1S5Q8TDH9 187 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 SCRN2Q96FV2 425 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 MCCC1Q96RQ3 725 aaPredicted RBP25.48■■□□□ 1.67
SSBP3-202ENST00000357475 ITM2CQ9NQX7 267 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 SCN8AQ9UQD0 1980 aa25.48■■□□□ 1.67
SSBP3-202ENST00000357475 A0A1W2PQ67 120 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 AREL1O15033 823 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 MYBL2P10244 700 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 TDGF1P13385 188 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 XPAP23025 273 aaPredicted RBP25.47■■□□□ 1.67
SSBP3-202ENST00000357475 POLR2LP62875 67 aaKnown RBP25.47■■□□□ 1.67
SSBP3-202ENST00000357475 POU6F1Q14863 301 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 CCDC38Q502W7 563 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 FAM160A2Q8N612 972 aaPredicted RBP25.47■■□□□ 1.67
SSBP3-202ENST00000357475 EID2BQ96D98 161 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 SYBUQ9NX95 663 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 NFU1Q9UMS0 254 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 SCML1Q9UN30 329 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 FADS3Q9Y5Q0 445 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 WDFY4Q6ZS81 3184 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 AVPR2P30518 371 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 HLTFQ14527 1009 aaKnown RBP eCLIP25.47■■□□□ 1.67
SSBP3-202ENST00000357475 HP1BP3Q5SSJ5 553 aaPredicted RBP25.47■■□□□ 1.67
SSBP3-202ENST00000357475 CRTC1Q6UUV9 634 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 C1orf210Q8IVY1 113 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 ZCCHC9Q8N567 271 aaKnown RBP25.47■■□□□ 1.67
SSBP3-202ENST00000357475 CAMKK1Q8N5S9 505 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 WDR83Q9BRX9 315 aaKnown RBP25.47■■□□□ 1.67
SSBP3-202ENST00000357475 TRIM56Q9BRZ2 755 aaKnown RBP25.47■■□□□ 1.67
SSBP3-202ENST00000357475 CYP8B1Q9UNU6 501 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 INVSQ9Y283 1065 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 KCTD3Q9Y597 815 aa25.47■■□□□ 1.67
SSBP3-202ENST00000357475 GOLGA8CPA6NN73 597 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 BUD23O43709 281 aaKnown RBP25.46■■□□□ 1.67
SSBP3-202ENST00000357475 SLC4A1P02730 911 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 ACSL1P33121 698 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 MMP12P39900 470 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 ADPRHP54922 357 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 VSNL1P62760 191 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 SARNPP82979 210 aaKnown RBP25.46■■□□□ 1.67
SSBP3-202ENST00000357475 PTPRCAPQ14761 206 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 MICALCLQ6ZW33 695 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 USP30Q70CQ3 517 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 USP45Q70EL2 814 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 LYSMD3Q7Z3D4 306 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 WRAP53Q9BUR4 548 aaKnown RBP25.46■■□□□ 1.67
SSBP3-202ENST00000357475 XAB2Q9HCS7 855 aaKnown RBP25.46■■□□□ 1.67
SSBP3-202ENST00000357475 ZNF711Q9Y462 761 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 ARL5AQ9Y689 179 aa25.46■■□□□ 1.67
SSBP3-202ENST00000357475 CCDC78A2IDD5 438 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 LAMTOR5O43504 91 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 CLDN7O95471 211 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 TUBB4BP68371 445 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 DHX9Q08211 1270 aaKnown RBP25.45■■□□□ 1.66
SSBP3-202ENST00000357475 ELF2Q15723 593 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 DPPA4Q7L190 304 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 OR14C36Q8NHC7 312 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 MAGEE1Q9HCI5 957 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 FZD4Q9ULV1 537 aa25.45■■□□□ 1.66
SSBP3-202ENST00000357475 PLRG1O43660 514 aaKnown RBP25.44■■□□□ 1.66
SSBP3-202ENST00000357475 MLNP12872 115 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 VIPR1P32241 457 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms