RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PDXPQ96GD0 296 aa16.81■□□□□ 0.28
PDLIM7-201ENST00000355572 ZNF599Q96NL3 588 aa16.81■□□□□ 0.28
PDLIM7-201ENST00000355572 APOOQ9BUR5 198 aa16.81■□□□□ 0.28
PDLIM7-201ENST00000355572 LGR4Q9BXB1 951 aa16.81■□□□□ 0.28
PDLIM7-201ENST00000355572 MRPL40Q9NQ50 206 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-201ENST00000355572 DONSONQ9NYP3 566 aa16.81■□□□□ 0.28
PDLIM7-201ENST00000355572 GPSM3Q9Y4H4 160 aa16.81■□□□□ 0.28
PDLIM7-201ENST00000355572 SCN8AQ9UQD0 1980 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 SSU72P8A0A1W2PR75 194 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 TMEM202A6NGA9 273 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 PDHA1P08559 390 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 TGM2P21980 687 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 SUOXP51687 545 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 AP1S1P61966 158 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 YPEL5P62699 121 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 GBE1Q04446 702 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 GALNT2Q10471 571 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 TBX2Q13207 712 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 ZNF235Q14590 738 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 PRRT3Q5FWE3 981 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 CDCP2Q5VXM1 449 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 TSPAN33Q86UF1 283 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 SLC35F3Q8IY50 421 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 TEX26Q8N6G2 289 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 PDCD7Q8N8D1 485 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 FAM181AQ8N9Y4 354 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 FAF2Q96CS3 445 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 NT5MQ9NPB1 228 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 DKK4Q9UBT3 224 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 TFR2Q9UP52 801 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 HYOU1Q9Y4L1 999 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 CSNK1G3Q9Y6M4 447 aa16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 URB1O60287 2271 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-201ENST00000355572 A0A1W2PNU3 283 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 PMS2P1A4D2B8 440 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 NPIPB15A6NHN6 443 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 C3orf70A6NLC5 250 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 YY2O15391 372 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 LZTS3O60299 673 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 OPA1O60313 960 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 MT-CO3P00414 261 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 FUCA1P04066 466 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 ALPIP09923 528 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 H2AFZP0C0S5 128 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 TMEM253P0C7T8 217 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 HOXB3P14651 431 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 CTPS1P17812 591 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 GARSP41250 739 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 MMP13P45452 471 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 DSC2Q02487 901 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 ILKQ13418 452 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 MESDQ14696 234 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 NFATC4Q14934 902 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 CFAP58Q5T655 872 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 FAXCQ5TGI0 409 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 ERAP2Q6P179 960 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 ENPP7Q6UWV6 458 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 H2AFVQ71UI9 128 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 HSD11B1LQ7Z5J1 315 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 HID1Q8IV36 788 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 CBARPQ8N350 705 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 DCBLD1Q8N8Z6 715 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 SLC35G2Q8TBE7 412 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 IFI44Q8TCB0 444 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 PDCD6IPQ8WUM4 868 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 OR1E3Q8WZA6 343 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 MAML1Q92585 1016 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 COQ10AQ96MF6 247 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 BOCQ9BWV1 1114 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 NHEJ1Q9H9Q4 299 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 FGF22Q9HCT0 170 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 SCUBE2Q9NQ36 999 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 UVRAGQ9P2Y5 699 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 RABGEF1Q9UJ41 708 aa16.79■□□□□ 0.28
PDLIM7-201ENST00000355572 H3BM21 787 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 FZD6O60353 706 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 CPP00450 1065 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 ELFN1P0C7U0 828 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 RENBPP51606 427 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 PPARDQ03181 441 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 NIPAL4Q0D2K0 466 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 ZCCHC8Q6NZY4 707 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 RD3Q7Z3Z2 195 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 CCL4L1Q8NHW4 92 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 PIH1D2Q8WWB5 315 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 CTNNBL1Q8WYA6 563 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 SPOCK2Q92563 424 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 SEMA3CQ99985 751 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 ZNF670Q9BS34 389 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 RCOR3Q9P2K3 495 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 SPASTQ9UBP0 616 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 CLCA2Q9UQC9 943 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 CHD6Q8TD26 2715 aa16.78■□□□□ 0.28
PDLIM7-201ENST00000355572 CPED1A4D0V7 1026 aa16.77■□□□□ 0.28
PDLIM7-201ENST00000355572 NEMP2A6NFY4 417 aa16.77■□□□□ 0.28
PDLIM7-201ENST00000355572 CBFA2T2O43439 604 aa16.77■□□□□ 0.28
PDLIM7-201ENST00000355572 SOCS5O75159 536 aa16.77■□□□□ 0.28
PDLIM7-201ENST00000355572 HEXIM1O94992 359 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms