RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 COPG1Q9Y678 874 aaKnown RBP22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 MTMR11A4FU01 709 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 WISP3O95389 354 aaPredicted RBP22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 JUNP05412 331 aaKnown RBP22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 HMBSP08397 361 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 HSPA1AP0DMV8 641 aaKnown RBP22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 HSPA1BP0DMV9 641 aaKnown RBP22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 ARPP19P56211 112 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 CDC16Q13042 620 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 PPM1LQ5SGD2 360 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 TMEM198Q66K66 360 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 BBS5Q8N3I7 341 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 UCMAQ8WVF2 138 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 CDK5RAP1Q96SZ6 601 aaKnown RBP22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 GPR62Q9BZJ7 368 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 KLHL4Q9C0H6 718 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 SLC27A5Q9Y2P5 690 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 PCDHB7Q9Y5E2 793 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 NEMP2A6NFY4 417 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 H7C4K7 107 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 GLP2RO95838 553 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 INHAP05111 366 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 ZDHHC11BP0C7U3 371 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 HNRNPLP14866 589 aaKnown RBP eCLIP22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 IMPDH1P20839 514 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 ETFBP38117 255 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 SULT2A1Q06520 285 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 ELAVL2Q12926 359 aaKnown RBP22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 ZNF235Q14590 738 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 MRNIPQ6NTE8 343 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 BRSK1Q8TDC3 778 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 RCN3Q96D15 328 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 CDRT15Q96T59 188 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 MEAF6Q9HAF1 191 aa22.35■■□□□ 1.17
NKX2-1-201ENST00000354822 GNRH1P01148 92 aa22.34■■□□□ 1.17
NKX2-1-201ENST00000354822 TACR2P21452 398 aa22.34■■□□□ 1.17
NKX2-1-201ENST00000354822 ARSDP51689 593 aa22.34■■□□□ 1.17
NKX2-1-201ENST00000354822 CHSY3Q70JA7 882 aa22.34■■□□□ 1.17
NKX2-1-201ENST00000354822 SEPT5Q99719 369 aaPredicted RBP22.34■■□□□ 1.17
NKX2-1-201ENST00000354822 CREBZFQ9NS37 354 aa22.34■■□□□ 1.17
NKX2-1-201ENST00000354822 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.34■■□□□ 1.17
NKX2-1-201ENST00000354822 SUFUQ9UMX1 484 aa22.34■■□□□ 1.17
NKX2-1-201ENST00000354822 EIF4E1BA6NMX2 242 aaKnown RBP22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 CASQ2O14958 399 aaPredicted RBP22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 PEX1O43933 1283 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 SP100P23497 879 aaPredicted RBP22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 MAPRE2Q15555 327 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 C5orf22Q49AR2 442 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 PIGGQ5H8A4 983 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 RNF111Q6ZNA4 994 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 CUZD1Q86UP6 607 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 PDSS2Q86YH6 399 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 PELI3Q8N2H9 469 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 HMX1Q9NP08 348 aaPredicted RBP22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 UTP6Q9NYH9 597 aaKnown RBP22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 DLGAP2Q9P1A6 1054 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 ADAMTS6Q9UKP5 1117 aa22.33■■□□□ 1.17
NKX2-1-201ENST00000354822 TMEM233B4DJY2 109 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 F5H5T6 163 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 TLR5O60602 858 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 SOAT2O75908 522 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 RAG1P15918 1043 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 ZNF423Q2M1K9 1284 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 ALG1LQ6GMV1 187 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 ZFP1Q6P2D0 407 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 FAM43BQ6ZT52 329 aaPredicted RBP22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 EFCAB3Q8N7B9 438 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 HIPK4Q8NE63 616 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 ANKRD49Q8WVL7 239 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 L3HYPDHQ96EM0 354 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 TBATAQ96M53 351 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 WDR41Q9HAD4 459 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 POPDC3Q9HBV1 291 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 CYP4F12Q9HCS2 524 aa22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 C6orf203Q9P0P8 240 aaPredicted RBP22.33■■□□□ 1.16
NKX2-1-201ENST00000354822 TTC24A2A3L6 582 aaPredicted RBP22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 ARVCFO00192 962 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 ENPP3O14638 875 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 CD3EAPO15446 510 aaKnown RBP22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 TBC1D4O60343 1298 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 SERPINF2P08697 491 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 KCNA5P22460 613 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 ACVRL1P37023 503 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 INHBCP55103 352 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 CDKN2DP55273 166 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 STX5Q13190 355 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 NADSYN1Q6IA69 706 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 ISCA2Q86U28 154 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 MRPL1Q9BYD6 325 aaKnown RBP22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 MAGEH1Q9H213 219 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 PSMD13Q9UNM6 376 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 VWA8A3KMH1 1905 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 CENPFP49454 3210 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 RPP40O75818 363 aaKnown RBP22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 LINGO3P0C6S8 592 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 RPL26P61254 145 aaKnown RBP22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 NFKB2Q00653 900 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 RNF19BQ6ZMZ0 732 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 LRRC8DQ7L1W4 858 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 CIR1Q86X95 450 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms