RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 A0A087X1B8 175 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 E2F8A0AVK6 867 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 H0YIN7 160 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 H3BMQ9 156 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 KCNH1O95259 989 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 HLA-DRAP01903 254 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 CD36P16671 472 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 DNAJB2P25686 324 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 CDH15P55291 814 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 AP1S2P56377 157 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SP4Q02446 784 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 GRB10Q13322 594 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PSMD5Q16401 504 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PGM2L1Q6PCE3 622 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SETD6Q8TBK2 473 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 COG8Q96MW5 612 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SPATA9Q9BWV2 254 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 RERGLQ9H628 205 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 AGPAT3Q9NRZ7 376 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ADAMTS6Q9UKP5 1117 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 LYVE1Q9Y5Y7 322 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PCM1Q15154 2024 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SYNJ2BP-COX16A0A087WUM0 186 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 FAM220BPB1ANY3 271 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SUPT3HB4E1H0 165 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MBL2P11226 248 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 PRG2P13727 222 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 RPL35P42766 123 aaKnown RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 RHDQ02161 417 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 DPYSL3Q14195 570 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 DEF8Q6ZN54 512 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 FAM92BQ6ZTR7 304 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 IGFN1Q86VF2 1251 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 CYP4Z1Q86W10 505 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 NRG4Q8WWG1 115 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MED10Q9BTT4 135 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MAN1C1Q9NR34 630 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 COX16Q9P0S2 106 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PI4KBQ9UBF8 816 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 TBC1D30Q9Y2I9 924 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MPZL2O60487 215 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 UPK1BO75841 260 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 NAT2P11245 290 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 CYP3A5P20815 502 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 POU1F1P28069 291 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 UQCRC1P31930 480 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MTHFRP42898 656 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 IDH3AP50213 366 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 NKX2-5P52952 324 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 PRMT2P55345 433 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 GABARAPL2P60520 117 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 IKBKEQ14164 716 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MED22Q15528 200 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SMTNL2Q2TAL5 461 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 STRIP1Q5VSL9 837 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ZNF425Q6IV72 752 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SLC51BQ86UW2 128 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ATAD1Q8NBU5 361 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ALG3Q92685 438 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 KAT2AQ92830 837 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 EPB41L4BQ9H329 900 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ANKRA2Q9H9E1 313 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 LRRC4Q9HBW1 653 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PACSIN3Q9UKS6 424 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 NCKAP1Q9Y2A7 1128 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PCDHGB3Q9Y5G1 929 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 NEXMIFQ5QGS0 1516 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 HTRA2O43464 458 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 AKAP3O75969 853 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MAP3K6O95382 1288 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PRAMEF1O95521 474 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 HMGN1P05114 100 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 DLDP09622 509 aaKnown RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 GRIA4P48058 902 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 BMXP51813 675 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 POU4F1Q01851 419 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PLA2G4EQ3MJ16 856 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 KRT77Q7Z794 578 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 COMMD7Q86VX2 200 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 IRF2BP1Q8IU81 584 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ANKRD52Q8NB46 1076 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 OR5J2Q8NH18 312 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 TRPM4Q8TD43 1214 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ADAMTS16Q8TE57 1224 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SLC20A1Q8WUM9 679 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 C7orf43Q8WVR3 580 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ASB15Q8WXK1 588 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SLC39A13Q96H72 371 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 REXO5Q96IC2 774 aaKnown RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 TWNKQ96RR1 684 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 NPAS2Q99743 824 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SSX3Q99909 188 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 PKP2Q99959 881 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MORF4L1Q9UBU8 362 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SEC14L4Q9UDX3 406 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 POLRMTO00411 1230 aaKnown RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 TRIM3O75382 744 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 CRTAPO75718 401 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 GDF11O95390 407 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms