RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CCDC153Q494R4 210 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 LRRC73Q5JTD7 316 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 CLEC6AQ6EIG7 209 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 DEFB107AQ8IZN7 70 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 SLAIN1Q8ND83 568 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 MYLIPQ8WY64 445 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 PTCD3Q96EY7 689 aaKnown RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 ZNF184Q99676 751 aaPredicted RBP13.97□□□□□ -0.17
TRIM4-201ENST00000349062 SAR1AQ9NR31 198 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 TAGLN3Q9UI15 199 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 RAD54BQ9Y620 910 aa13.97□□□□□ -0.17
TRIM4-201ENST00000349062 K7ERQ8 282 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 TGDSO95455 350 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 SERPINF2P08697 491 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 FOXB2Q5VYV0 432 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 OR4K2Q8NGD2 314 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 SLC26A7Q8TE54 656 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 PYDC1Q8WXC3 89 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 NMD3Q96D46 503 aaKnown RBP13.96□□□□□ -0.17
TRIM4-201ENST00000349062 RPL10LQ96L21 214 aaKnown RBP13.96□□□□□ -0.17
TRIM4-201ENST00000349062 TCF7L2Q9NQB0 619 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 GIMAP2Q9UG22 337 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 SCN5AQ14524 2016 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 ACSL4O60488 711 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 SIX3O95343 332 aaPredicted RBP13.96□□□□□ -0.17
TRIM4-201ENST00000349062 GOT2P00505 430 aaKnown RBP13.96□□□□□ -0.17
TRIM4-201ENST00000349062 TFEBP19484 476 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 FGFR3P22607 806 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 WEE1P30291 646 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 GNA12Q03113 381 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 UGP2Q16851 508 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 ZRANB3Q5FWF4 1079 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 TSTD2Q5T7W7 516 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 OR52E8Q6IFG1 317 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 SCIMPQ6UWF3 145 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 SDCCAG8Q86SQ7 713 aaPredicted RBP13.96□□□□□ -0.17
TRIM4-201ENST00000349062 ENDOVQ8N8Q3 282 aaKnown RBP13.96□□□□□ -0.17
TRIM4-201ENST00000349062 EZH1Q92800 747 aaPredicted RBP13.96□□□□□ -0.17
TRIM4-201ENST00000349062 TMA16Q96EY4 203 aaKnown RBP13.96□□□□□ -0.17
TRIM4-201ENST00000349062 SLC45A3Q96JT2 553 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 TUBGCP5Q96RT8 1024 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 GPR22Q99680 433 aa13.96□□□□□ -0.17
TRIM4-201ENST00000349062 CCDC162PA2VCL2 907 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 H7C4K7 107 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 PSMD3O43242 534 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 TBL1XO60907 577 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 C1RP00736 705 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 GRK2P25098 689 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 MZF1P28698 734 aaPredicted RBP13.96□□□□□ -0.18
TRIM4-201ENST00000349062 NUDT2P50583 147 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 PKNOX1P55347 436 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 POTEHQ6S545 545 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 IMP4Q96G21 291 aaKnown RBP13.96□□□□□ -0.18
TRIM4-201ENST00000349062 PRDM16Q9HAZ2 1276 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 NDE1Q9NXR1 346 aa13.96□□□□□ -0.18
TRIM4-201ENST00000349062 UBA2Q9UBT2 640 aaPredicted RBP13.96□□□□□ -0.18
TRIM4-201ENST00000349062 ZBTB14O43829 449 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 CCL5P13501 91 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 ARCN1P48444 511 aaKnown RBP13.95□□□□□ -0.18
TRIM4-201ENST00000349062 SERINC3Q13530 473 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRIM4-201ENST00000349062 FSCBQ5H9T9 825 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 SCUBE1Q8IWY4 988 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 LRRC43Q8N309 656 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 TXNDC5Q8NBS9 432 aaKnown RBP13.95□□□□□ -0.18
TRIM4-201ENST00000349062 ZNF398Q8TD17 642 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 DDI1Q8WTU0 396 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 UBE2OQ9C0C9 1292 aaKnown RBP13.95□□□□□ -0.18
TRIM4-201ENST00000349062 TMEM248Q9NWD8 314 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 ZNF236Q9UL36 1845 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 KLF11O14901 512 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 CSF2RAP15509 400 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 HADHAP40939 763 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 CDKN2DP55273 166 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 IKBKEQ14164 716 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 SEL1L3Q68CR1 1132 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 KDELC1Q6UW63 502 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 TRIM67Q6ZTA4 783 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 SNX32Q86XE0 403 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 UMODL1-AS1Q8N2C9 162 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 PXYLP1Q8TE99 480 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 YME1L1Q96TA2 773 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 CLSTN3Q9BQT9 956 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 CCDC68Q9H2F9 335 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 IL1RL2Q9HB29 575 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 NCKIPSDQ9NZQ3 722 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 PCDHB9Q9Y5E1 797 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 MYO16Q9Y6X6 1858 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 CASP8AP2Q9UKL3 1982 aa13.95□□□□□ -0.18
TRIM4-201ENST00000349062 IQCF5A8MTL0 148 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 PPP6CO00743 305 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 GLP2RO95838 553 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 COPAP53621 1224 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 GLT6D1Q7Z4J2 308 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 ARHGAP24Q8N264 748 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 FAM156AQ8NDB6 213 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 OR13J1Q8NGT2 312 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms